ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_31670

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_31670_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..803
DNA (801bp) protein (267aa)
RuBisCO-like protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
RuBisCO-like protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=5083443 bin=GWF1_Burkholderiales_GWF1_66_17 species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
RuBisCO-like protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_31670_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

807..2216
DNA (1410bp) protein (470aa)
Hrp-dependent type III effector protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Hrp-dependent type III effector protein id=5083444 bin=GWF1_Burkholderiales_GWF1_66_17 species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Hrp-dependent type III effector protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_31670_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2259..3032
DNA (774bp) protein (258aa)
3-oxoacyl-[acyl-carrier-protein] reductase, putative (EC:1.1.1.100) Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
3-oxoacyl-[acyl-carrier-protein] reductase, putative id=1278651 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_31670_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3065..4075
DNA (1011bp) protein (337aa)
TRAP dicarboxylate transporter subunit DctP Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
TRAP dicarboxylate transporter subunit DctP id=5083446 bin=GWF1_Burkholderiales_GWF1_66_17 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
TRAP dicarboxylate transporter subunit DctP
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_31670_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4091..4612
DNA (522bp) protein (174aa)
inner membrane protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Putative inner membrane protein id=1278653 bin=GWE1_Burkholderiales_65_30 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
inner membrane protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_31670_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4609..5199
DNA (591bp) protein (197aa)
inner membrane protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
inner membrane protein id=5083448 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
inner membrane protein
Displaying 6 items

View Taxonomy