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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..868
DNA (867bp) protein (289aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] id=5082521 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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875..1978
DNA (1104bp) protein (368aa)
quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Quinolinate synthetase id=1274771 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
quinolinate synthetase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2039..2242)
DNA (204bp) protein (68aa)
rpoZ; DNA-directed RNA polymerase omega chain; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
rpoZ; DNA-directed RNA polymerase omega chain; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] id=5082523 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rpoZ; DNA-directed RNA polymerase omega chain
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2270..2890)
DNA (621bp) protein (207aa)
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8] id=5082524 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
gmk; guanylate kinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2893..3828)
DNA (936bp) protein (312aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Uncharacterized protein id=1274774 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3890..4897
DNA (1008bp) protein (336aa)
serine/threonine protein kinase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
serine/threonine protein kinase id=5082526 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
serine/threonine protein kinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_157592_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4894..5769
DNA (876bp) protein (292aa)
protein serine/threonine phosphatase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
serine/threonine protein phosphatase id=5082527 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
protein serine/threonine phosphatase
Displaying 7 items

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