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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..524)
DNA (522bp) protein (174aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH1_9BURK
ATP-dependent Clp protease, proteolytic subunit ClpP
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(747..2057)
DNA (1311bp) protein (437aa)
tig; trigger factor; K03545 trigger factor Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
tig; trigger factor; K03545 trigger factor id=5083115 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
tig; trigger factor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_trna_1
unknown

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comp(2133..2216)
DNA (84bp)
transferRNA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2329..2973)
DNA (645bp) protein (215aa)
Asp/Glu racemase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Asp/Glu racemase id=1266389 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Asp/Glu racemase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2970..5567)
DNA (2598bp) protein (866aa)
TRAP transporter 4TM/12TM fusion protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
TRAP transporter, 4TM/12TM fusion protein id=1266390 bin=GWE1_Burkholderiales_65_30 species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
TRAP-type uncharacterized transport system, fused permease component
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5739..6725)
DNA (987bp) protein (329aa)
TRAP transporter solute receptor TAXI family protein; K07080 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
TRAP transporter solute receptor TAXI family protein; K07080 id=5083118 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
TRAP transporter solute receptor TAXI family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6710..6883)
DNA (174bp) protein (58aa)
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6907..8295)
DNA (1389bp) protein (463aa)
hypothetical protein; K00837 [EC:2.6.1.-] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein; K00837 [EC:2.6.1.-] id=5083119 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8324..9214)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000381442F
RpiR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
RpiR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_150020_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9363..10091)
DNA (729bp) protein (243aa)
acriflavin resistance protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Acriflavin resistance protein id=1266395 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
acriflavin resistance protein
Displaying 10 items

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