ggKbase home page

RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2..391
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00035FD444
beta-lactamase domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
beta-lactamase domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

556..1206
DNA (651bp) protein (217aa)
Endonuclease III n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C370_THEGP
HhH-GPD family protein; K07457 endonuclease III related protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
HhH-GPD family protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1253..1513)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q351_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1514..1714)
DNA (201bp) protein (67aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4819351 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_5
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(1801..2013)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IGU1_9PLAN
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2015..2251)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IGU2_9PLAN
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2526..2777
DNA (252bp) protein (84aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2752..3420
DNA (669bp) protein (223aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

3500..4735
DNA (1236bp) protein (412aa)
TetR family transcriptional regulator Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative transcriptional regulator, TetR family id=4478329 bin=GWF2_Nitrospirae_44_13 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4751..5221
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RDM0_9EURY
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

5237..5605
DNA (369bp) protein (123aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKP6_THEYD
7-cyano-7-deazaguanine reductase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(5586..6608)
DNA (1023bp) protein (341aa)
nagZ; beta-N-acetylglucosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
nagZ; beta-N-acetylglucosaminidase (EC:3.2.1.52)
Beta-hexosaminidase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DZ30_9FIRM
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_70645_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6633..7376)
DNA (744bp) protein (248aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=2428738 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Displaying 13 items

View Taxonomy