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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3..116)
DNA (114bp) protein (38aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(113..532)
DNA (420bp) protein (140aa)
DNA polymerase beta domain protein region n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XS73_9BACT
putative nucleotidyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative nucleotidyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(576..995)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4713772 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1001..1840)
DNA (840bp) protein (280aa)
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
parB-like partition protein id=7202075 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
chromosome segregation DNA-binding protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1818..2588)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000365B6E3
chromosome partitioning ATPase; K03496 chromosome partitioning protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
chromosome partitioning ATPase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2723..3427)
DNA (705bp) protein (235aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T6X1_THEIA
methyltransferase GidB
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3448..5355)
DNA (1908bp) protein (636aa)
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG id=4731281 bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

5615..6727
DNA (1113bp) protein (371aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein id=4573693 bin=GWC2_Deltaproteobacteria_55_46 species=Photobacterium sp. AK15 genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6740..7087
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Photobacterium sp. AK15 RepID=L8JC98_9GAMM
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7134..7745)
DNA (612bp) protein (204aa)
Vitamin B12 dependent methionine synthase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KAZ8_HALHC
vitamin B12 dependent methionine synthase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
vitamin B12 dependent methionine synthase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7746..9314)
DNA (1569bp) protein (523aa)
virulence factor protein; K03980 virulence factor Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Virulence factor protein id=2967102 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
virulence factor protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9423..9938)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IRU6_LEPFC
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10137..10811
DNA (675bp) protein (225aa)
outer membrane lipoprotein carrier protein; K03634 outer membrane lipoprotein carrier protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Outer membrane lipoprotein carrier protein LolA id=3990065 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
outer membrane lipoprotein carrier protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10825..11883
DNA (1059bp) protein (353aa)
Zinc metalloprotease (EC:3.4.24.-) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Zinc metalloprotease (EC:3.4.24.-)
Putative Zinc metalloprotease n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF5_9BACT
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

11915..12169
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCK3_DESTA
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12178..13041
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG7_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

13249..14571
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000370B539
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
chromosomal replication initiation protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_14711_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

14767..15876
DNA (1110bp) protein (370aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7S4_GEODF
Displaying 18 items

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