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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2..928
DNA (927bp) protein (309aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
TPR repeat-containing protein id=1899433 bin=GWD2_Nitrospirae-related_57_8 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

949..1083
DNA (135bp) protein (45aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1169..1792)
DNA (624bp) protein (208aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z7C7_MELRP
glycerol-3-phosphate acyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
glycerol-3-phosphate acyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

1912..2817
DNA (906bp) protein (302aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein id=3454611 bin=GWC2_Deltaproteobacteria_42_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3010..3927)
DNA (918bp) protein (306aa)
arginase (EC:3.5.3.1) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
arginase (EC:3.5.3.1)
Arginase family protein id=2423574 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3914..4177)
DNA (264bp) protein (88aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme id=1703069 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4239..4421
DNA (183bp) protein (61aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4478..4633
DNA (156bp) protein (52aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4620..4721
DNA (102bp) protein (34aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4728..5228)
DNA (501bp) protein (167aa)
recX; recombination regulator RecX; K03565 regulatory protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
regulatory protein RecX id=4416155 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
recX; recombination regulator RecX
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists


comp(5239..6285)
DNA (1047bp) protein (349aa)
recA; recombinase A; K03553 recombination protein RecA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Protein RecA id=3737758 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
recA; recombinase A
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6550..7122)
DNA (573bp) protein (191aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
2'-5' RNA ligase id=4416152 bin=GWC2_Nitrospirae-rel_56_14 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
LigT; 2'-5' RNA ligase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7179..7658)
DNA (480bp) protein (160aa)
competence-damage inducible protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC5A
competence/damage-inducible protein cina; K03742 competence/damage-inducible protein CinA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
competence/damage-inducible protein cina
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7655..8098)
DNA (444bp) protein (148aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Phosphatidylglycerophosphatase A id=4416143 bin=GWC2_Nitrospirae-rel_56_14 species=Thiorhodospira sibirica genus=Thiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
phosphatidylglycerophosphatase A
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8102..9262)
DNA (1161bp) protein (387aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YWP6_9BACT
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9259..10056)
DNA (798bp) protein (266aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00036FE2FE
phosphatidate cytidylyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10076..10849)
DNA (774bp) protein (258aa)
UDP diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YXU0_9BACT
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11002..11328)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003688C38
thioredoxin Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
thioredoxin
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11374..11745)
DNA (372bp) protein (124aa)
septum formation initiator family protein; K05589 cell division protein FtsB Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Septum formation initiator family protein id=4193537 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
septum formation initiator family protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_15450_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11742..12833)
DNA (1092bp) protein (364aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WML6_GEOS8
Displaying 20 items

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