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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(29..1213)
DNA (1185bp) protein (395aa)
UPF0272 protein Mahau_1643 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZJ8_MAHA5
hypothetical protein; K09121 hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1366..2319)
DNA (954bp) protein (318aa)
hemH; ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2436..3467)
DNA (1032bp) protein (344aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase id=4734414 bin=GWC2_Deltaproteobacteria_55_46 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3515..6370)
DNA (2856bp) protein (952aa)
Putative GAF sensor protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCC3_GEOUR
putative GAF sensor protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative GAF sensor protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6911..7615)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003619F23
hypothetical protein; K07164 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7641..8195)
DNA (555bp) protein (185aa)
Thiol-disulfide oxidoreductase ResA n=7 Tax=Bacillus cereus RepID=B7HKY2_BACC7
resA; thiol-disulfide oxidoreductase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
resA protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8335..11346)
DNA (3012bp) protein (1004aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Spermine synthase id=4876746 bin=GWA2_OP3_52_12 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
spermine synthase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11425..12525)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Virginiamycin B lyase (Modular protein) id=3235146 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Copper resistance protein CopC/CopD
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(12522..13805)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003601196
putative hydrolase transmembrane protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative copper export protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_8925_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(13888..14586)
DNA (699bp) protein (233aa)
id=4348688 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
id=4348688 bin=GWC2_Deltaproteobacteria_42_51 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Displaying 10 items

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