ggKbase home page

RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1..342)
DNA (342bp) protein (114aa)
vorCD; 2-ketoisovalerate ferredoxin reductase subunits gamma/delta (EC:1.2.7.7); K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
pyruvate ferredoxin oxidoreductase, gamma subunit (EC:1.2.7.1)
Pyruvate synthase gamma/delta subunits id=3322663 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

474..1238
DNA (765bp) protein (255aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1239..2165)
DNA (927bp) protein (309aa)
malate dehydrogenase (NAD); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000382CFF9
malate dehydrogenase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_4
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(2236..4161)
DNA (1926bp) protein (642aa)
aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
Putative aconitate hydratase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HX40_9BACT
aconitate hydratase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4384..4836)
DNA (453bp) protein (151aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
NUDIX hydrolase n=2 Tax=Geobacter metallireducens RepID=Q39WZ4_GEOMG
NUDIX hydrolase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4883..7690)
DNA (2808bp) protein (936aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IJJ1_9PLAN
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

7893..9458
DNA (1566bp) protein (522aa)
PAS domain S-box n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0A6_DESTA
PAS domain S-box Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PAS domain S-box
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

9480..9848
DNA (369bp) protein (123aa)
two component sigma-54 specific Fis family transcriptional regulator Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=4711585 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

9927..10295
DNA (369bp) protein (123aa)
two component, sigma54 specific, transcriptional regulator, Fis family; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RifCSPlowO2_12_Nitrospinae_39_15_curat
Two component, sigma54 specific, transcriptional regulator, Fis family id=4711585 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component, sigma54 specific, transcriptional regulator, Fis family
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10332..10802
DNA (471bp) protein (157aa)
rnhA; ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
rnhA; ribonuclease H (EC:3.1.26.4)
RNaseH ribonuclease n=1 Tax=Halomonas stevensii RepID=UPI0002EDBFF5
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_30161_11
unknown

Not on your lists

10860..10931
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 11 items

View Taxonomy