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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(1..996)
DNA (996bp) protein (332aa)
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Carbon starvation protein CstA id=3927082 bin=GWF2_Lentisphaerae_57_35 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
carbon starvation protein CstA
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(1014..2291)
DNA (1278bp) protein (426aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase id=4948123 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2397..3392)
DNA (996bp) protein (332aa)
hisZ; ATP phosphoribosyltransferase; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hisZ; ATP phosphoribosyltransferase regulatory subunit id=14625485 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hisZ; ATP phosphoribosyltransferase regulatory subunit
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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3543..4628
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39RB3_GEOMG
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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4654..5073
DNA (420bp) protein (140aa)
Putative uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4087793 bin=GWC2_Deltaproteobacteria_42_51 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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5109..5564
DNA (456bp) protein (152aa)
bifunctional protein argHA (EC:4.3.2.1 2.3.1.1); K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
bifunctional argininosuccinate lyase/N-acetylglutamate synthase (EC:4.3.2.1 2.3.1.1)
Bifunctional protein argHA n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKV6_THEYD
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

5680..6393
DNA (714bp) protein (238aa)
Cell division and transport-associated protein TolQ Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
TolQ protein id=4347775 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Cell division and transport-associated protein TolQ
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6390..8768
DNA (2379bp) protein (793aa)
putative histidine kinase (EC:2.7.13.3) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative histidine kinase (EC:2.7.13.3)
Putative uncharacterized protein id=3339783 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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8785..10284
DNA (1500bp) protein (500aa)
response regulator receiver modulated metal dependent phosphohydrolase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
HD-GYP domain id=4795526 bin=GWC2_Nitrospirae-rel_56_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
response regulator receiver modulated metal dependent phosphohydrolase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10265..10675
DNA (411bp) protein (137aa)
tolR protein; K03560 biopolymer transport protein TolR Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
TolR protein id=4940060 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
tolR protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10727..11593
DNA (867bp) protein (289aa)
TonB family protein; K03832 periplasmic protein TonB Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
TonB family protein; K03646 colicin import membrane protein id=14626727 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

11590..12942
DNA (1353bp) protein (451aa)
Protein TolB n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDC0_GEOUR
WD40 domain-containing protein; K03641 TolB protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
WD40 domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12994..13827
DNA (834bp) protein (278aa)
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Peptidoglycan-associated lipoprotein id=3338589 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6128_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

14008..15102
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJZ2_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
Displaying 14 items

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