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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(232..414)
DNA (183bp) protein (61aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(407..613)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036E2E42
putative transcriptional regulator Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1020..3155)
DNA (2136bp) protein (712aa)
Peptidase n=1 Tax=planctomycete KSU-1 RepID=I3IL43_9PLAN
peptidase M1, membrane alanine aminopeptidase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
peptidase M1, membrane alanine aminopeptidase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

3400..5958
DNA (2559bp) protein (853aa)
radical SAM protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein id=15193566 bin=GWC2_NOV_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
radical SAM protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6076..7617
DNA (1542bp) protein (514aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RNAse G n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD24_GEOUR
ribonuclease
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7644..8516)
DNA (873bp) protein (291aa)
hypothetical protein
Uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein id=3918613 bin=GWF2_Bacteroidetes_49_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8520..10004)
DNA (1485bp) protein (495aa)
peptidase M28 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Peptidase M28 id=4554532 bin=GWF2_Bacteroidetes_43_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
peptidase M28
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10132..11043
DNA (912bp) protein (304aa)
TPR domain lipoprotein n=2 Tax=Bacteria RepID=B5EC52_GEOBB
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

11040..12197
DNA (1158bp) protein (386aa)
LysM domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
LysM domain protein id=2477309 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
LysM domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12421..12648
DNA (228bp) protein (76aa)
Putative helix-turn-helix motif protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YY68_9BACT
XRE family transcriptional regulator Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
XRE family transcriptional regulator
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12688..13788
DNA (1101bp) protein (367aa)
Type IV pilus biogenesis protein PilM n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TZ03_9DELT
pilM; type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
pilM; type IV pilus biogenesis protein PilM
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

13807..14385
DNA (579bp) protein (193aa)
Tfp pilus assembly protein, PilN-like; K02663 type IV pilus assembly protein PilN Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Fimbrial assembly family protein id=1737738 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

14388..15008
DNA (621bp) protein (207aa)
pilus assembly protein, PilO; K02664 type IV pilus assembly protein PilO Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
Pilus assembly protein, PilO id=3144137 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

15005..15589
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LNA0_DESBD
hypothetical protein; K02665 type IV pilus assembly protein PilP Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

15597..17807
DNA (2211bp) protein (737aa)
type IV pilus secretin PilQ Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Type IV pilus secretin PilQ id=3624475 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
type IV pilus secretin PilQ
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

17894..18970
DNA (1077bp) protein (359aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=2244594 bin=GWB2_Proteobacteria_55_19 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

19006..19446
DNA (441bp) protein (147aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

19589..20581
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037204FE
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

20574..21050
DNA (477bp) protein (159aa)
nucleotidyltransferase n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B775C2
cytidyltransferase-related domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cytidyltransferase-related domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

21104..22135
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z3F6_9BACT
glycosyl transferase family protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
glycosyl transferase family protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

22148..22345
DNA (198bp) protein (66aa)
hypothetical protein; K09791 hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4628282 bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_trna_1
unknown

Not on your lists

comp(22388..22460)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_22
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists


comp(22620..24176)
DNA (1557bp) protein (519aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003778AAE
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_23
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(24267..25058)
DNA (792bp) protein (264aa)
Metallophosphoesterase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUC6_GEOS8
metallophosphoesterase; K09769 hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
metallophosphoesterase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_24
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(25145..26710)
DNA (1566bp) protein (522aa)
Ribonuclease Y n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RNY_SYNFM
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
metal dependent phosphohydrolase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_25
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(26716..27288)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00035DA3CF
5-formyltetrahydrofolate cyclo-ligase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_26
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(27952..28233)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XNR0_9BACT
hypothetical protein; K09888 cell division protein ZapA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_27
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(28235..28414)
DNA (180bp) protein (60aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_28
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

28586..29353
DNA (768bp) protein (256aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTV6_ACEAZ
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_929_29
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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29350..30315
DNA (966bp) protein (322aa)
Oxidoreductase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z8X8_9BACT
oxidoreductase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
oxidoreductase
Displaying items 1-30 of 39 in total

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