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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_1
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(193..687)
DNA (495bp) protein (165aa)
adventurous gliding motility protein S Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
Biopolymer transport protein id=2948568 bin=GWC2_Deltaproteobacteria_42_51 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
adventurous gliding motility protein S
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_2
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(758..1234)
DNA (477bp) protein (159aa)
biopolymer transport protein ExbD/TolR Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
Putative uncharacterized protein id=2948563 bin=GWC2_Deltaproteobacteria_42_51 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
biopolymer transport protein ExbD/TolR
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1215..1853)
DNA (639bp) protein (213aa)
putative motility membrane protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative transport related membrane protein id=2948557 bin=GWC2_Deltaproteobacteria_42_51 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
putative motility membrane protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1869..2219)
DNA (351bp) protein (117aa)
id=2948555 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
id=2948555 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2171..3247)
DNA (1077bp) protein (359aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Tetratricopeptide repeat id=2948549 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3219..6110)
DNA (2892bp) protein (964aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Tetratricopeptide repeat id=2948549 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6094..8031)
DNA (1938bp) protein (646aa)
id=2948548 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
id=2948548 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8089..8625)
DNA (537bp) protein (179aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

8893..9195
DNA (303bp) protein (101aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

9228..10514
DNA (1287bp) protein (429aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10584..10928
DNA (345bp) protein (115aa)
cytochrome C class I Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cytochrome C class I
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10999..12456)
DNA (1458bp) protein (486aa)
Diguanylate cyclase with GAF sensor n=1 Tax=uncultured bacterium RepID=K2ECZ1_9BACT
diguanylate cyclase domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
diguanylate cyclase domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(12538..13614)
DNA (1077bp) protein (359aa)
response regulator receiver modulated CheB methylesterase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Chemotaxis response regulator protein-glutamate methylesterase id=2570258 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
response regulator receiver modulated CheB methylesterase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(13611..16304)
DNA (2694bp) protein (898aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XRW2_9BACT
CheA signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(16330..17886)
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI00034928E2
methyl-accepting chemotaxis sensory transducer Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
methyl-accepting chemotaxis sensory transducer
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(17900..18547)
DNA (648bp) protein (216aa)
Chemotaxis signal transduction protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4BZP8_DESTA
chemotaxis signal transduction protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
chemotaxis signal transduction protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(18522..18986)
DNA (465bp) protein (155aa)
CheW protein n=2 Tax=Rhodothermus marinus RepID=D0MGC1_RHOM4
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
CheW protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(18983..20494)
DNA (1512bp) protein (504aa)
Methyltransferase domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7Q8I7_9CYAN
methylase of chemotaxis methyl-accepting protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
methylase of chemotaxis methyl-accepting protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

20709..21287
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YZJ1_9BACT
Uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

21465..22532
DNA (1068bp) protein (356aa)
prephenate dehydratase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
P-protein id=3721095 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
prephenate dehydratase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

22523..23605
DNA (1083bp) protein (361aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=15192173 bin=GWC2_NOV_55_46 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_22
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

23734..23907
DNA (174bp) protein (58aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_23
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

23897..23995
DNA (99bp) protein (33aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_24
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

24005..24316
DNA (312bp) protein (104aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_25
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

24414..27572
DNA (3159bp) protein (1053aa)
UvrD/REP helicase domain protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
UvrD/REP helicase domain protein, putative id=1726123 bin=GWB2_Clostridiales_37_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
UvrD/REP helicase domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_26
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

27569..30448
DNA (2880bp) protein (960aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4349261 bin=GWA2_Elusimicrobia_56_46 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_27
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

30641..32242
DNA (1602bp) protein (534aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE07_GEOUR
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_28
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists


32296..33972
DNA (1677bp) protein (559aa)
30S ribosomal protein S1 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YW03_9BACT
rpsA; 30S ribosomal protein S1 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
rpsA; 30S ribosomal protein S1
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_29
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

33983..34876
DNA (894bp) protein (298aa)
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26)
Signal peptide peptidase A, Serine peptidase, MEROPS family S49 id=4309593 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_396_30
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

34970..35269
DNA (300bp) protein (100aa)
histone family protein DNA-binding protein; K05788 integration host factor subunit beta Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Integration host factor, beta subunit, putative id=3360720 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integration host factor subunit beta
Displaying items 1-30 of 47 in total

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