ggKbase home page

RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

1..1188
DNA (1188bp) protein (396aa)
Pili retraction protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRM4_SYNAS
pili retraction protein; K02669 twitching motility protein PilT Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
pili retraction protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

1213..1707
DNA (495bp) protein (165aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

1726..2379
DNA (654bp) protein (218aa)
MJ0042 family finger-like protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJ62_DESAA
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2386..2820
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YHQ7_9BACT
putative transcriptional regulator, Crp/Fnr family Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative transcriptional regulator, Crp/Fnr family
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2933..4132
DNA (1200bp) protein (400aa)
Type IV pilus biogenesis protein PilC n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YWI8_9BACT
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
pilus assembly protein PilC
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4147..5784
DNA (1638bp) protein (546aa)
Multi-sensor signal transduction histidine kinase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PAS domain S-box protein id=1935136 bin=GWD2_Nitrospirae-related_57_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Multi-sensor signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

5837..6838
DNA (1002bp) protein (334aa)
hypothetical protein; K07028 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
det:DET0514 hypothetical protein; K07028 id=1241250 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6828..7397
DNA (570bp) protein (190aa)
aminoglycoside phosphotransferase; K07028 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
gntK; APH family phosphotransferase fused to gluconate kinase family enzyme; K07028 id=14426304 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
aminoglycoside phosphotransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_32452_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

7390..7746
DNA (357bp) protein (119aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23) id=14428673 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ppnK; polyphosphate/ATP-dependent NAD kinase
Displaying 9 items

View Taxonomy