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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_1
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..234)
DNA (234bp) protein (78aa)
Transposase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C7G4_9SPHN
Transposase {ECO:0000313|EMBL:EIZ79355.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2
transposase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1191..2270)
DNA (1080bp) protein (360aa)
ISCps8, transposase id=4219936 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ISCps8, transposase Tax=GWA2_Rokubacteria_70_23_curated
transposase IS116/IS110/IS902
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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2544..2780
DNA (237bp) protein (79aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein id=24472249 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3204..3524
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0X0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM29862.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononid
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3704..3904
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=3984532 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4034..4330
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN12_9BURK
hypothetical cytosolic protein; K09803 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical cytosolic protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_7
R_Proteobacteria_53_8, Proteobacteria, Bacteria

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4327..4545
DNA (219bp) protein (73aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
Putative uncharacterized protein id=4819355 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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4685..4870
DNA (186bp) protein (62aa)
Putative uncharacterized protein id=2653029 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_9
unknown

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4874..5164
DNA (291bp) protein (97aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5174..5563
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=4833152 bin=GWC2_Methylomirabilis_70_24 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5563..5952
DNA (390bp) protein (130aa)
Uncharacterized protein id=4833151 bin=GWC2_Methylomirabilis_70_24 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_36290_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5949..6782
DNA (834bp) protein (278aa)
acyl-CoA dehydrogenase-like; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=GWA2_Rokubacteria_70_23_curated
Acyl-CoA dehydrogenase-like protein id=4145038 bin=GWF2_Methylomirabilis_70_14 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
Displaying 12 items

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