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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..320)
DNA (318bp) protein (106aa)
Sensor protein (EC:2.7.13.3) Tax=GWC2_Rokubacteria_70_16_curated
Putative Sensor protein id=4892758 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(460..867)
DNA (408bp) protein (136aa)
OmpA/MotB domain protein id=4892759 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
outer membrane lipoprotein omp16 (peptidoglycan-associated lipoprotein) Tax=GWC2_Rokubacteria_70_16_curated
outer membrane lipoprotein omp16 (peptidoglycan-associated lipoprotein)
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1406..1549
DNA (144bp) protein (48aa)
id=4892760 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4892760 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1584..2813
DNA (1230bp) protein (410aa)
Peptidase M23 id=4892761 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M23 Tax=GWC2_Rokubacteria_70_16_curated
peptidase M23
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3034..4986)
DNA (1953bp) protein (651aa)
acsA; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) (EC:6.2.1.1) Tax=GWC2_Rokubacteria_70_16_curated
acsA; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) (EC:6.2.1.1)
Acetyl-coenzyme A synthetase id=4892762 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5267..5704)
DNA (438bp) protein (146aa)
Uncharacterized protein id=4892763 bin=GWC2_Methylomirabilis_70_16 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5738..7330)
DNA (1593bp) protein (531aa)
Putative fatty acid CoA ligase id=4892764 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative long-chain-fatty-acid-CoA ligase Tax=GWC2_Rokubacteria_70_16_curated
putative long-chain-fatty-acid-CoA ligase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7327..9060)
DNA (1734bp) protein (578aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=4892765 bin=GWC2_Methylomirabilis_70_16 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9057..10166)
DNA (1110bp) protein (370aa)
ABC transporter ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] Tax=GWC2_Rokubacteria_70_16_curated
Spermidine/putrescine ABC transporter ATPase subunit id=4892766 bin=GWC2_Methylomirabilis_70_16 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Spermidine/putrescine import ATP-binding protein PotA
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10217..11230)
DNA (1014bp) protein (338aa)
Iron-binding periplasmic protein id=4892794 bin=GWC2_Methylomirabilis_70_16 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
iron ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
iron ABC transporter substrate-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21005_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11453..11998
DNA (546bp) protein (182aa)
Putative uncharacterized protein id=4892795 bin=GWC2_Methylomirabilis_70_16 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
Displaying 11 items

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