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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..419
DNA (417bp) protein (139aa)
leuA; 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (EC:2.3.3.13) Tax=GWC2_Rokubacteria_70_16_curated
leuA; 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (EC:2.3.3.13)
2-isopropylmalate synthase id=4827334 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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422..1507
DNA (1086bp) protein (362aa)
leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=GWC2_Rokubacteria_70_16_curated
3-isopropylmalate dehydrogenase id=4827333 bin=GWC2_Methylomirabilis_70_16 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
leuB; 3-isopropylmalate dehydrogenase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1529..2530
DNA (1002bp) protein (334aa)
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11) Tax=GWC2_Rokubacteria_70_16_curated
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=4827332 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2562..3305
DNA (744bp) protein (248aa)
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=GWC2_Rokubacteria_70_16_curated
tRNA pseudouridine synthase A (EC:5.4.99.12)
Pseudouridylate synthase I id=4827331 bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3366..4133
DNA (768bp) protein (256aa)
Putative formate dehydrogenase family accessory protein (FdhD) id=4827330 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Rokubacteria_70_16_curated
formate dehydrogenase family accessory protein (FdhD)
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4402..5208
DNA (807bp) protein (269aa)
Cytochrome c assembly protein id=3366873 bin=GWC2_Methylomirabilis_70_16 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytochrome c biogenesis protein Tax=GWC2_Rokubacteria_70_16_curated
ResC/HemX-like cytochrome c biogenesis membrane protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5208..6497
DNA (1290bp) protein (430aa)
glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=GWC2_Rokubacteria_70_16_curated
Glutamyl-tRNA reductase id=3366879 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glutamyl-tRNA reductase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6494..7402
DNA (909bp) protein (303aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=GWC2_Rokubacteria_70_16_curated
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase id=3366885 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7399..8307
DNA (909bp) protein (303aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=GWC2_Rokubacteria_70_16_curated
Uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase id=3366892 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uroporphyrin-III C-methyltransferase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8311..9294
DNA (984bp) protein (328aa)
hemB; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24) Tax=GWC2_Rokubacteria_70_16_curated
hemB; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase id=3366897 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9307..9753
DNA (447bp) protein (149aa)
Transcriptional regulator, BadM/Rrf2 family id=3366901 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
BadM/Rrf2 family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
BadM/Rrf2 family transcriptional regulator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9773..10726
DNA (954bp) protein (318aa)
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47) Tax=GWC2_Rokubacteria_70_16_curated
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47)
Cysteine synthase id=3367014 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18475_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10742..11044
DNA (303bp) protein (101aa)
Putative Molybdopterin biosynthesis protein moeB (Modular protein) id=3367016 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Molybdopterin biosynthesis protein moeB Tax=GWC2_Rokubacteria_70_16_curated
Molybdopterin biosynthesis protein moeB
Displaying 13 items

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