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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82

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Displaying items 1-30 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(504..992)
DNA (489bp) protein (163aa)
Transcriptional regulator BkdR n=4 Tax=Pseudomonas RepID=I2BTB8_PSEFL
Transcriptional regulator BkdR of isoleucine and valine catabolism operon
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFQ62684.1}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1188..2423
DNA (1236bp) protein (412aa)
bkdA1; 2-oxoisovalerate dehydrogenase E1 component subunit alpha (EC:1.2.4.4)
BkdA1 protein {ECO:0000313|EMBL:AFJ59571.1}; EC=1.2.4.4 {ECO:0000313|EMBL:AFJ59571.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
2-oxoisovalerate dehydrogenase E1 component, alpha subunit n=2 Tax=Pseudomonas RepID=I2BZ88_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_3
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2425..3483
DNA (1059bp) protein (353aa)
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC:1.2.4.4) rbh
2-oxoisovalerate dehydrogenase E1 component, beta subunit {ECO:0000313|EMBL:EIK72272.1}; EC=1.2.4.4 {ECO:0000313|EMBL:EIK72272.1};; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria;
2-oxoisovalerate dehydrogenase E1 component, beta subunit n=3 Tax=Pseudomonas RepID=I2BXK3_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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3484..4749
DNA (1266bp) protein (422aa)
bkdB; 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamide acyltransferase (EC:2.3.1.168) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
bkdB; 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamide acyltransferase (EC:2.3.1.168)
2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamide acyltransferase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BT40_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4754..6133
DNA (1380bp) protein (460aa)
bkdC; 2-oxoisovalerate dehydrogenase E3 component, dihydrolipoyl dehydrogenase (EC:1.8.1.4) rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudom
Dihydrolipoyl dehydrogenase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BUP0_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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6339..7358
DNA (1020bp) protein (340aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase n=2 Tax=Pseudomonas RepID=I4KGA9_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7609..8502)
DNA (894bp) protein (298aa)
Putative acetyltransferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J727_9PSED
GNAT family acetyltransferase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
GNAT family acetyltransferase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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8786..9712
DNA (927bp) protein (309aa)
Amidinotransferase family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BLB2_PSEFL
amidinotransferase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
amidinotransferase family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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9724..10770
DNA (1047bp) protein (349aa)
arcB; ornithine cyclodeaminase (EC:4.3.1.12) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
arcB; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KU97_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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10998..11777
DNA (780bp) protein (260aa)
Histidine ABC transporter, periplasmic histidine-binding protein HisJ n=2 Tax=Pseudomonas RepID=I2BUL8_PSEFL
hisJ2; histidine ABC transporter, periplasmic histidine-binding protein HisJ
hisJ2; histidine ABC transporter, periplasmic histidine-binding protein HisJ Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11956..12657
DNA (702bp) protein (234aa)
Histidine ABC transporter, permease protein HisQ n=2 Tax=Pseudomonas RepID=I2BSK3_PSEFL
hisQ2; histidine ABC transporter permease HisQ
HisQ2 protein {ECO:0000313|EMBL:AFJ57236.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A50
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12654..13367
DNA (714bp) protein (238aa)
Histidine ABC transporter, permease protein HisM n=2 Tax=Pseudomonas RepID=I2BU77_PSEFL
hisM2; histidine ABC transporter permease HisM
HisM2 protein {ECO:0000313|EMBL:AFJ57810.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A50
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_13
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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13371..14201
DNA (831bp) protein (277aa)
Histidine ABC transporter, ATP-binding protein HisP n=3 Tax=Pseudomonas RepID=I2BM37_PSEFL
hisP2; histidine ABC transporter ATP-binding protein HisP Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hisP2; histidine ABC transporter ATP-binding protein HisP
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14206..14703
DNA (498bp) protein (166aa)
Transcriptional regulator, AsnC family n=3 Tax=Pseudomonas RepID=I2BKI2_PSEFL
AsnC family transcriptional regulator
AsnC family transcriptional regulator Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14831..15712)
DNA (882bp) protein (294aa)
Putative helicase/glycosylase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KKM7_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15709..16929)
DNA (1221bp) protein (407aa)
Radical SAM domain protein n=3 Tax=Pseudomonas RepID=I2BK66_PSEFL
radical SAM domain-containing protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFJ54649.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17030..18367)
DNA (1338bp) protein (446aa)
pvdA; L-ornithine 5-monooxygenase PvdA (EC:1.13.12.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
pvdA; L-ornithine 5-monooxygenase PvdA (EC:1.13.12.-)
L-ornithine 5-monooxygenase PvdA n=3 Tax=Pseudomonas RepID=I2BZG5_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18487..18969)
DNA (483bp) protein (161aa)
RNA polymerase sigma-70 factor, ECF subfamily, FpvI n=3 Tax=Pseudomonas RepID=I2BVU4_PSEFL
fpvI; RNA polymerase sigma-70 factor, ECF subfamily, FpvI
fpvI; RNA polymerase sigma-70 factor, ECF subfamily, FpvI Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19306..20478
DNA (1173bp) protein (391aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Pseudomonas RepID=I2BTR1_PSEFL
RND family efflux transporter MFP subunit Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RND family efflux transporter MFP subunit
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20480..22453
DNA (1974bp) protein (658aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KKN1_9PSED
efflux ABC transporter, ATP-binding/permease protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
efflux ABC transporter, ATP-binding/permease protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22446..23858
DNA (1413bp) protein (471aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BRR6_PSEFL
NodT family efflux transporter outer membrane lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
NodT family efflux transporter outer membrane lipoprotein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23966..24721
DNA (756bp) protein (252aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2C009_PSEFL
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24830..25597
DNA (768bp) protein (256aa)
Transcriptional regulator, GntR family n=3 Tax=Pseudomonas RepID=I2BU88_PSEFL
GntR family transcriptional regulator
GntR family transcriptional regulator Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25835..27037
DNA (1203bp) protein (401aa)
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=3 Tax=Pseudomonas RepID=S6H1J0_9PSED
branched-chain amino acid ABC transporter periplasmic amino acid-binding protein
branched-chain amino acid ABC transporter periplasmic amino acid-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27095..27955
DNA (861bp) protein (287aa)
Permease component of ABC transporter protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KKN5_9PSED
branched-chain amino acid ABC transporter permease Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
High-affinity branched-chain amino acid transport system permease protein LivH
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27957..28967
DNA (1011bp) protein (337aa)
Putative ABC transporter membrane protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JF02_9PSED
branched-chain amino acid ABC transporter permease Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
branched-chain amino acid ABC transporter permease
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28964..29713
DNA (750bp) protein (250aa)
Branched-chain amino acid ABC transporter, ATP binding protein n=3 Tax=Pseudomonas RepID=I2BMB9_PSEFL
branched-chain amino acid ABC transporter, ATP binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55402.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29713..30408
DNA (696bp) protein (232aa)
Branched-chain amino acid ABC transporter, ATP-binding protein n=4 Tax=Pseudomonas RepID=I2BPI6_PSEFL
branched-chain amino acid ABC transporter ATP-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
branched-chain amino acid ABC transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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30422..31690
DNA (1269bp) protein (423aa)
N-carbamyl-L-amino acid amidohydrolase (EC:3.5.1.87) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
N-carbamyl-L-amino acid amidohydrolase (EC:3.5.1.87)
Allantoate amidohydrolase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KUC5_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_82_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31687..33090
DNA (1404bp) protein (468aa)
Amidase family protein n=2 Tax=Pseudomonas RepID=I2BTP6_PSEFL
amidase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
amidase family protein
Displaying items 1-30 of 160 in total

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