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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1078)
DNA (1077bp) protein (359aa)
Protein TolB n=4 Tax=Pseudomonas RepID=I2BPJ4_PSEFL
tolB; Tol-Pal system beta propeller repeat-containing protein TolB
tolB; Tol-Pal system beta propeller repeat-containing protein TolB Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_2
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1117..2190)
DNA (1074bp) protein (358aa)
TolA protein n=4 Tax=Pseudomonas RepID=I2BNE2_PSEFL
TolA protein rbh
tolA; TolA protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_3
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2190..2651)
DNA (462bp) protein (154aa)
TolR protein n=7 Tax=Pseudomonas RepID=I2BKG9_PSEFL
putative transporter-like membrane protein
TolR protein {ECO:0000313|EMBL:EIK71529.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2666..3361)
DNA (696bp) protein (232aa)
TolQ protein n=5 Tax=Pseudomonas RepID=I2BTX2_PSEFL
tolQ; TolQ protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
tolQ; TolQ protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3363..3818)
DNA (456bp) protein (152aa)
ybgC; Tol-Pal system-associated acyl-CoA thioesterase (EC:3.1.2.-)
ybgC; Tol-Pal system-associated acyl-CoA thioesterase (EC:3.1.2.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Tol-Pal system-associated acyl-CoA thioesterase n=3 Tax=Pseudomonas RepID=I2BZE5_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3958..5016)
DNA (1059bp) protein (353aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Holliday junction ATP-dependent DNA helicase RuvB n=5 Tax=Pseudomonas RepID=I2BRQ9_PSEFL
ruvB; Holliday junction DNA helicase RuvB
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5017..5628)
DNA (612bp) protein (204aa)
ruvA; Holliday junction DNA helicase RuvA (EC:3.6.1.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Holliday junction ATP-dependent DNA helicase RuvA n=5 Tax=Pseudomonas PF5_PSEFL">RepID=I2BPF5_PSEFL
ruvA; Holliday junction DNA helicase RuvA rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5699..6223)
DNA (525bp) protein (175aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Pseudomonas RepID=S6GSM4_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6395..7141)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein PflA506_4225 n=3 Tax=Pseudomonas RepID=I2BSG8_PSEFL
YebC/PmpR family DNA-binding regulatory protein rbh
Probable transcriptional regulatory protein PflA506_4225 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7277..9052)
DNA (1776bp) protein (592aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Aspartyl-tRNA synthetase Aspartyl-tRNA(Asn) synthetase (EC:6.1.1.23 6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Pseudomonas sp. CF150 RepID=S6K6W1_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9161..9382)
DNA (222bp) protein (74aa)
Uncharacterized protein n=6 Tax=Pseudomonas RepID=C3JYT2_PSEFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59321.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9545..9898)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6I5A1_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10080..10553)
DNA (474bp) protein (158aa)
DNA-binding stress protein, Dps family n=8 Tax=Pseudomonas RepID=I4KCA7_PSEFL
DNA-binding stress protein, Dps family rbh
DNA-binding stress protein, Dps family {ECO:0000313|EMBL:EIK62347.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10981..11583
DNA (603bp) protein (201aa)
Cold-shock DNA-binding domain protein n=4 Tax=Pseudomonas RepID=I2BMJ9_PSEFL
cold-shock protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55482.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_15
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11657..11863)
DNA (207bp) protein (69aa)
Protein SlyX homolog n=4 Tax=Pseudomonas RepID=I2BK92_PSEFL
SlyX family protein
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxan
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11867..12292)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J0B1_9PSED
histidine triad domain protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
histidine triad domain protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12625..12813)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6IT43_9PSED
Uncharacterized protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13033..14331
DNA (1299bp) protein (433aa)
Outer membrane porin OprD n=3 Tax=Pseudomonas RepID=I2BVR7_PSEFL
oprD; outer membrane porin OprD
OprD protein {ECO:0000313|EMBL:AFJ58350.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14515..15357)
DNA (843bp) protein (281aa)
Small-conductance mechanosensitive channel n=3 Tax=Pseudomonas RepID=I2BTS8_PSEFL
mscS; small-conductance mechanosensitive channel
MscS protein {ECO:0000313|EMBL:AFJ57661.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15494..15979)
DNA (486bp) protein (162aa)
UPF0234 protein PflA506_4235 n=5 Tax=Pseudomonas RepID=I2BYC4_PSEFL
YajQ
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16103..17020
DNA (918bp) protein (306aa)
panE_1; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pse
2-dehydropantoate 2-reductase n=3 Tax=Pseudomonas RepID=I2BZB4_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17067..19103
DNA (2037bp) protein (679aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Sensory box histidine kinase n=3 Tax=Pseudomonas RepID=I2BY82_PSEFL
sensory box histidine kinase rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19106..19684
DNA (579bp) protein (193aa)
ATP:cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein {ECO:0000313|EMBL:AFJ59794.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AFJ59794.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace
ATP:cob(I)alamin adenosyltransferase n=3 Tax=Pseudomonas RepID=I2BZW1_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19825..20769)
DNA (945bp) protein (315aa)
mutator mutT protein/thiamine monophosphate synthase (TenI) (EC:3.6.1.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
mutator mutT protein/thiamine monophosphate synthase (TenI) (EC:3.6.1.-)
Mutator mutT protein/thiamine monophosphate synthase (TenI) n=2 Tax=Pseudomonas RepID=I2BYE3_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20789..22006)
DNA (1218bp) protein (406aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=3 Tax=Pseudomonas RepID=I2BPC5_PSEFL
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22131..24866)
DNA (2736bp) protein (912aa)
Protein translocase subunit SecA n=3 Tax=Pseudomonas RepID=I2BMB3_PSEFL
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace
secA; Preprotein translocase subunit SecA rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25173..25628
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6HUK2_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25633..27111)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BPL2_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56195.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27317..29206
DNA (1890bp) protein (630aa)
Chemotactic transducer PctA n=3 Tax=Pseudomonas RepID=I2BVJ0_PSEFL
pctA_1; chemotactic transducer PctA Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
pctA_1; chemotactic transducer PctA
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2381_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29434..30555
DNA (1122bp) protein (374aa)
group 1 family glycosyltransferase (EC:2.4.-.-)
group 1 family glycosyltransferase (EC:2.4.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Glycosyltransferase, group 1 family n=3 Tax=Pseudomonas RepID=I2BN71_PSEFL
Displaying items 1-30 of 85 in total

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