ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..933)
DNA (933bp) protein (311aa)
prc; tail-specific protease (EC:3.4.21.102) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
prc; tail-specific protease (EC:3.4.21.102)
Tail-specific protease n=1 Tax=Pseudomonas sp. CF150 RepID=S6KM63_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_2
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1295..1948)
DNA (654bp) protein (218aa)
HAD hydrolase, family IB n=3 Tax=Pseudomonas RepID=I2BLR0_PSEFL
HAD hydrolase, family IB Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
HAD hydrolase, family IB
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1982..2971)
DNA (990bp) protein (330aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JBN8_9PSED
ABC transporter ATP-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ABC transporter ATP-binding protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2968..3768)
DNA (801bp) protein (267aa)
Putative ABC transporter membrane protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J902_9PSED
ABC transporter permease Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ABC transporter permease
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3755..4600)
DNA (846bp) protein (282aa)
ABC transporter, permease protein n=3 Tax=Pseudomonas RepID=I2BVP0_PSEFL
ABC transporter permease Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ABC transporter permease
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4597..5403)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BTZ5_PSEFL
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFJ57728.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5581..6657)
DNA (1077bp) protein (359aa)
ABC transporter, periplasmic substrate-binding protein, putative n=3 Tax=Pseudomonas RepID=I2BVD5_PSEFL
ABC transporter periplasmic substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58218.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7009..7722
DNA (714bp) protein (238aa)
Transcriptional regulator, GntR family/UbiC transcription regulator-associated domain protein n=2 Tax=Pseudomonas RepID=I4K5W4_PSEFL
Transcriptional regulator, GntR family/UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EIK60104.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
transcriptional regulator, GntR family/UbiC transcription regulator-associated domain protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7869..8822)
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BK63_PSEFL
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8822..9721)
DNA (900bp) protein (300aa)
Cation ABC transporter, MZT family, permease protein n=2 Tax=Pseudomonas RepID=I2BYZ8_PSEFL
cation ABC transporter, MZT family, permease protein
cation ABC transporter, MZT family, permease protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9718..10464)
DNA (747bp) protein (249aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KM54_9PSED
cation ABC transporter, MZT family, ATP-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
cation ABC transporter, MZT family, ATP-binding protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10461..11381)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KVR6_9PSED
cation ABC transporter, MZT family, periplasmic cation-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
cation ABC transporter, MZT family, periplasmic cation-binding protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11401..11961)
DNA (561bp) protein (187aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BVL6_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58299.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11958..12281)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J8Z2_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12278..12814)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6J145_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12811..14013)
DNA (1203bp) protein (401aa)
PepSY-associated TM helix domain protein n=2 Tax=Pseudomonas RepID=I2BYZ0_PSEFL
PepSY-associated TM helix domain-containing protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
PepSY-associated TM helix domain-containing protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14774..15931
DNA (1158bp) protein (386aa)
KamA family protein n=2 Tax=Pseudomonas RepID=I2BTY4_PSEFL
KamA family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57717.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15928..17295
DNA (1368bp) protein (456aa)
ATP-grasp domain protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BVQ1_PSEFL
ATP-grasp domain-containing protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ATP-grasp domain-containing protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17300..18016
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J8Y7_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18013..19245
DNA (1233bp) protein (411aa)
Transporter, major facilitator family, putative n=2 Tax=Pseudomonas RepID=I2BP85_PSEFL
transporter, major facilitator family
Uncharacterized protein {ECO:0000313|EMBL:AFJ56068.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19352..19810)
DNA (459bp) protein (153aa)
Glyoxalase family protein n=2 Tax=Pseudomonas RepID=I2BQV4_PSEFL
glyoxalase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
glyoxalase family protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19885..20340)
DNA (456bp) protein (152aa)
Redox-sensitive transcriptional activator SoxR n=3 Tax=Pseudomonas RepID=I2BL04_PSEFL
soxR; redox-sensitive transcriptional activator SoxR
SoxR protein {ECO:0000313|EMBL:AFJ54937.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20440..20805
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6HI29_9PSED
antibiotic biosynthesis monooxygenase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
antibiotic biosynthesis monooxygenase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20794..21891)
DNA (1098bp) protein (366aa)
Putative sigma54-dependent regulatory protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IPT2_9PSED
sigma-54 dependent transcriptional regulator Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
sigma-54 dependent transcriptional regulator rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22159..22425
DNA (267bp) protein (89aa)
Lipoprotein, putative n=2 Tax=Pseudomonas RepID=I2BN09_PSEFL
lipoprotein
lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22658..23818
DNA (1161bp) protein (387aa)
Aminotransferase, class V n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQN4_PSEFL
class V aminotransferase
Uncharacterized protein {ECO:0000313|EMBL:AFJ56567.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23867..25675
DNA (1809bp) protein (603aa)
peptidase, M24 family (EC:3.4.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
peptidase, M24 family (EC:3.4.-.-) rbh
Peptidase, M24 family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BSB5_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25714..26304)
DNA (591bp) protein (197aa)
DSBA oxidoreductase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IPS6_9PSED
DsbA-like thioredoxin domain protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
DsbA-like thioredoxin domain protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26339..27070)
DNA (732bp) protein (244aa)
Short chain dehydrogenase/reductase family protein n=3 Tax=Pseudomonas RepID=I2BWG6_PSEFL
short chain dehydrogenase/reductase family protein
short chain dehydrogenase/reductase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2461_30
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27169..27450)
DNA (282bp) protein (94aa)
Lipoprotein, putative n=5 Tax=Pseudomonas RepID=I2BYQ6_PSEFL
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EIK67331.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha
Displaying items 1-30 of 31 in total

View Taxonomy