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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(359..1177)
DNA (819bp) protein (273aa)
shikimate 5-dehydrogenase/quinate 5-dehydrogenase family protein (EC:1.1.1.-)
shikimate 5-dehydrogenase/quinate 5-dehydrogenase family protein (EC:1.1.1.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Shikimate 5-dehydrogenase/quinate 5-dehydrogenase family protein n=2 Tax=Pseudomonas RepID=I2BRX0_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1343..1708
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BLM6_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK63702.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1942..2136
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BNQ2_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55885.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2228..2410
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BYJ2_PSEFL
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2414..3481)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GZR6_9PSED
membrane protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
membrane protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3653..4966
DNA (1314bp) protein (438aa)
peptidase, U32 family (EC:3.4.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
peptidase, U32 family (EC:3.4.-.-) rbh
Peptidase, U32 family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BVE8_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4989..6668)
DNA (1680bp) protein (560aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQ15_PSEFL
methyl-accepting chemotaxis protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
methyl-accepting chemotaxis protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6848..8170)
DNA (1323bp) protein (441aa)
Na+/H+ antiporter family protein n=2 Tax=Pseudomonas fluorescens RepID=I2BS33_PSEFL
Na+/H+ antiporter family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57066.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8397..10544
DNA (2148bp) protein (716aa)
Putative methyl-accepting chemotaxis protein n=2 Tax=Pseudomonas RepID=S6H4K1_9PSED
methyl-accepting chemotaxis protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
methyl-accepting chemotaxis protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10673..11986)
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Sensor histidine kinase n=3 Tax=Pseudomonas RepID=I2BLX5_PSEFL
sensor histidine kinase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11983..12651)
DNA (669bp) protein (223aa)
DNA-binding response regulator n=3 Tax=Pseudomonas RepID=I2BMR1_PSEFL
DNA-binding response regulator
DNA-binding response regulator Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12651..12962)
DNA (312bp) protein (104aa)
Peptidase propeptide and YPEB domain protein n=4 Tax=Pseudomonas RepID=I2BWG8_PSEFL
peptidase propeptide and YPEB domain-containing protein
Peptidase propeptide and YpeB domain protein {ECO:0000313|EMBL:EIK63401.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12962..13264)
DNA (303bp) protein (101aa)
Peptidase propeptide and YPEB domain protein n=2 Tax=Pseudomonas RepID=I2BTE4_PSEFL
peptidase propeptide and YPEB domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57527.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13423..14502
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KBW9_PSEFL
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14600..14956
DNA (357bp) protein (119aa)
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase n=10 Tax=Pseudomonas RepID=C3K685_PSEFS
queD; queuosine biosynthesis protein QueD
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15355..16623
DNA (1269bp) protein (423aa)
Cytosine permease, putative n=2 Tax=Pseudomonas RepID=I2BKB9_PSEFL
codB; cytosine permease
CodB protein {ECO:0000313|EMBL:AFJ54702.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16674..17909
DNA (1236bp) protein (412aa)
codA; cytosine deaminase (EC:3.5.4.1) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
codA; cytosine deaminase (EC:3.5.4.1)
Cytosine deaminase n=3 Tax=Pseudomonas RepID=I2BMC5_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17919..20069)
DNA (2151bp) protein (717aa)
lipase, class 3 (EC:3.1.1.3) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
lipase, class 3 (EC:3.1.1.3) rbh
Lipase, class 3 n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K701_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20083..20862)
DNA (780bp) protein (260aa)
Putative lipoprotein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KCZ1_PSEFL
lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
lipoprotein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20855..21691)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JB58_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21691..23586)
DNA (1896bp) protein (632aa)
Type VI secretion system Vgr family protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KC72_PSEFL
ImpA family type VI secretion-associated protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ImpA family type VI secretion-associated protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23883..24869)
DNA (987bp) protein (329aa)
Putative epimerase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KQQ2_9PSED
diaminopimelate epimerase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
diaminopimelate epimerase rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25219..26370
DNA (1152bp) protein (384aa)
Transporter, major facilitator family n=3 Tax=Pseudomonas RepID=I2BZ61_PSEFL
major facilitator family transporter Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
major facilitator family transporter
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26379..27296)
DNA (918bp) protein (306aa)
Putative type III secretion effector protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K3K4_PSEFL
type III secretion effector protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
type III secretion effector protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27473..27790)
DNA (318bp) protein (106aa)
Putative type III secretion effector protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K5R7_PSEFL
type III secretion effector protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
type III secretion effector protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27932..28951)
DNA (1020bp) protein (340aa)
Putative type III secretion effector protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K7M1_PSEFL
type III secretion effector protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
type III secretion effector protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29186..31579)
DNA (2394bp) protein (798aa)
TonB-dependent siderophore receptor n=1 Tax=Pseudomonas sp. CF150 RepID=S6J632_9PSED
TonB-dependent outermembrane ferric citrate receptor Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
TonB-dependent outermembrane ferric citrate receptor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31677..32627)
DNA (951bp) protein (317aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Pseudomonas RepID=I2BYU8_PSEFL
sigma factor regulatory protein, FecR/PupR family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
sigma factor regulatory protein, FecR/PupR family
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32654..33154)
DNA (501bp) protein (167aa)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Pseudomonas RepID=I2BTX8_PSEFL
ECF subfamily RNA polymerase sigma-70 factor Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ECF subfamily RNA polymerase sigma-70 factor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_776_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33234..33635)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KGU0_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
Displaying items 1-30 of 36 in total

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