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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_1
unknown

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1..171
DNA (171bp) protein (57aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_trna_4
unknown

Not on your lists

comp(42..114)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_trna_3
unknown

Not on your lists

comp(195..276)
DNA (82bp)
transferRNA
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_trna_2
unknown

Not on your lists

comp(338..410)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_trna_1
unknown

Not on your lists

comp(446..519)
DNA (74bp)
transferRNA
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

795..1649
DNA (855bp) protein (285aa)
folD; bifunctional protein FolD (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=2 Tax=Pseudomonas RepID=I2BVX1_PSEFL
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1858..2781
DNA (924bp) protein (308aa)
pbpG; D-alanyl-D-alanine endopeptidase (EC:3.4.21.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
pbpG; D-alanyl-D-alanine endopeptidase (EC:3.4.21.-)
D-alanyl-D-alanine endopeptidase n=3 Tax=Pseudomonas RepID=I2BTQ4_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2893..3723)
DNA (831bp) protein (277aa)
Putative lipoprotein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KS23_9PSED
lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
lipoprotein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3767..3928
DNA (162bp) protein (54aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BLG5_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55098.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3925..4335)
DNA (411bp) protein (137aa)
Lipoprotein, putative n=3 Tax=Pseudomonas RepID=I2BVK9_PSEFL
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EIK61606.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresc
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4542..7763
DNA (3222bp) protein (1074aa)
Putative transporter-like membrane protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J4R9_9PSED
RND transporter, heavy metal efflux (HME) family, permease protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RND transporter, heavy metal efflux (HME) family, permease protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7753..8922
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J7J0_9PSED
RND family efflux transporter MFP subunit Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RND family efflux transporter MFP subunit
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8906..10321
DNA (1416bp) protein (472aa)
Putative lipoprotein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KS28_9PSED
NodT family efflux transporter outer membrane lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
NodT family efflux transporter outer membrane lipoprotein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10441..11724)
DNA (1284bp) protein (428aa)
N-carbamyl-L-amino acid amidohydrolase (EC:3.5.1.87) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
N-carbamyl-L-amino acid amidohydrolase (EC:3.5.1.87) rbh
Allantoate amidohydrolase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KIA3_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11873..13360)
DNA (1488bp) protein (496aa)
Putative integral membrane transporter n=2 Tax=Pseudomonas RepID=S6H2E9_9PSED
permease, cytosine/purine, uracil, thiamine, allantoin family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
permease, cytosine/purine, uracil, thiamine, allantoin family
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13954..15393
DNA (1440bp) protein (480aa)
hydA; dihydropyrimidinase (EC:3.5.2.2) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hydA; dihydropyrimidinase (EC:3.5.2.2)
Phenylhydantoinase n=2 Tax=Pseudomonas RepID=S6H3Z9_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_13
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15499..16866
DNA (1368bp) protein (456aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=2 Tax=Pseudomonas RepID=I2BU33_PSEFL
pyridine nucleotide-disulfide oxidoreductase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
pyridine nucleotide-disulfide oxidoreductase family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16866..18140
DNA (1275bp) protein (425aa)
Dihydroorotate dehydrogenase family/4Fe-4S binding domain protein n=2 Tax=Pseudomonas RepID=I2BR81_PSEFL
dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56764.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18254..18874)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=3 Tax=Pseudomonas RepID=I2BP53_PSEFL
TetR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ56036.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18991..19356
DNA (366bp) protein (122aa)
Copper resistance protein CopC n=2 Tax=Pseudomonas RepID=I2BMJ0_PSEFL
copC; copper resistance protein CopC
copC; copper resistance protein CopC Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19360..20220
DNA (861bp) protein (287aa)
Putative copper resistance protein D n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H402_9PSED
copD; copper resistance protein D Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
copD; copper resistance protein D
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20483..21745
DNA (1263bp) protein (421aa)
Putative family S43 non-peptidase protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6INT3_9PSED
outer membrane porin, OprD family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
outer membrane porin, OprD family rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21976..22794
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6IDC4_9PSED
NAD dependent epimerase/dehydratase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
NAD dependent epimerase/dehydratase family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22821..23696
DNA (876bp) protein (292aa)
SMP-30/Gluconolaconase/LRE family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQW6_PSEFL
SMP-30/Gluconolaconase/LRE family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SMP-30/Gluconolaconase/LRE family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23742..24704
DNA (963bp) protein (321aa)
TRAP transporter solute receptor, DctP family n=3 Tax=Pseudomonas RepID=I2BP72_PSEFL
TRAP transporter solute receptor, DctP family
Uncharacterized protein {ECO:0000313|EMBL:AFJ56055.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24770..25297
DNA (528bp) protein (176aa)
Putative C4-dicarboxylate transporter small subunit n=2 Tax=Pseudomonas RepID=S6H406_9PSED
TRAP dicarboxylate transporter subunit DctQ Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
TRAP dicarboxylate transporter subunit DctQ
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1775_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25299..26225
DNA (927bp) protein (309aa)
TRAP transporter, DctM subunit n=3 Tax=Pseudomonas RepID=I2BMN7_PSEFL
TRAP transporter subunit DctM
TRAP transporter subunit DctM Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying 27 items

View Taxonomy