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RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_1
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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comp(20..253)
DNA (234bp) protein (78aa)
ATP-dependent zinc metallopeptidase - cell division protein; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=GWF2_Melainabacteria_32_7_curated
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_2
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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comp(470..1732)
DNA (1263bp) protein (421aa)
LL-diaminopimelate aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=GWF2_Melainabacteria_32_7_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DBL3_9BACT
LL-diaminopimelate aminotransferase
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_3
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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2005..2421
DNA (417bp) protein (139aa)
ribosomal subunit interface protein Tax=GWF2_Melainabacteria_32_7_curated
yfiA; ribosomal subunit interface protein; K05808 putative sigma-54 modulation protein id=17994 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ribosomal subunit interface protein
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_4
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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2621..2875
DNA (255bp) protein (85aa)
seg 38..48 Tax=GWF2_Melainabacteria_32_7_curated
seg 38..48 id=17966 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_5

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3058..3975
DNA (918bp) protein (306aa)
metal dependent phosphohydrolase id=17960 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EKE03104.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
metal dependent phosphohydrolase
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_6

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4035..4514
DNA (480bp) protein (160aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncul
CheD, stimulates methylation of MCP proteins n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN12_9FIRM id=17969 bin=ACD20 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_7

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4527..4886
DNA (360bp) protein (120aa)
Regulator of chemotaxis and motility n=1 Tax=uncultured bacterium RepID=K2DBM0_9BACT
Regulator of chemotaxis and motility {ECO:0000313|EMBL:EKE03106.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cheY1; chemotaxis and motility response regulator CheY
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_8
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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5012..6061
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E165_9BACT
Uncharacterized protein Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_9
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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6192..7085
DNA (894bp) protein (298aa)
N-acetylneuraminate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DYY1_9BACT
N-acetylneuraminate synthase
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_10
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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7069..7557
DNA (489bp) protein (163aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
neuA; acylneuraminate cytidylyltransferase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] id=17964 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_11
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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7571..9454
DNA (1884bp) protein (628aa)
Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R834_9THEO id=17967 bin=ACD20 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
hypothetical protein Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
hypothetical protein
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_12
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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comp(9628..10134)
DNA (507bp) protein (169aa)
Transcriptional regulator, PadR family n=1 Tax=uncultured bacterium RepID=K2DBM8_9BACT
PadR family transcriptional regulator Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
PadR family transcriptional regulator
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_13
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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10337..11086
DNA (750bp) protein (250aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31) Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
uppS; undecaprenyl pyrophosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=17980 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_14
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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11090..11680
DNA (591bp) protein (197aa)
nucleoside-triphosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
nucleoside-triphosphatase; K01516 nucleoside-triphosphatase [EC:3.6.1.15] id=17983 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
nucleoside-triphosphatase
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_15
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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11775..12929
DNA (1155bp) protein (385aa)
seg 374..400 Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
seg 374..400 id=17959 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_16
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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13022..14086
DNA (1065bp) protein (355aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM46_9CHLR
putative FMN oxidoreductase Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
putative FMN oxidoreductase
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_17
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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14422..14814
DNA (393bp) protein (131aa)
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_18
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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15178..15645
DNA (468bp) protein (156aa)
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_19
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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15668..16144
DNA (477bp) protein (159aa)
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_20
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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comp(16219..17376)
DNA (1158bp) protein (386aa)
alanine racemase (EC:5.1.1.1) Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IUK5_9CHRO id=17984 bin=ACD20 species=Cyanothece sp. CCY0110 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_21
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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17509..18537
DNA (1029bp) protein (343aa)
Oxidoreductase protein n=1 Tax=uncultured bacterium RepID=K2EAS9_9BACT
putative dehydrogenase Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
oxidoreductase GFO/IDH/MOCA family/hexapeptide repeat-containing acetyltransferase
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_22
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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18857..19183
DNA (327bp) protein (109aa)
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_23
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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19450..20772
DNA (1323bp) protein (441aa)
Trigger factor n=1 Tax=uncultured bacterium RepID=K2DBJ8_9BACT
trigger factor; K03545 trigger factor Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
trigger factor
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_24
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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20813..21421
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
clpP-2; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=17977 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_25
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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21437..22750
DNA (1314bp) protein (438aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX (EC:3.4.21.92); K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
clpX; ATP-dependent protease ATP-binding subunit ClpX (EC:3.4.21.92)
cyc:PCC7424_3131 clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=17997 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_26
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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22877..25267
DNA (2391bp) protein (797aa)
hypothetical protein; K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
tjr:TherJR_2560 ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=17978 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
lon; hypothetical protein
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_27
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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25406..26050
DNA (645bp) protein (215aa)
seg 4..15 Tax=GWF2_Melainabacteria_32_7_curated
seg 4..15 id=19189 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_28
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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comp(26085..27875)
DNA (1791bp) protein (597aa)
mutL; putative DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL Tax=GWF2_Melainabacteria_32_7_curated
DNA mismatch repair protein MutL id=3493508 bin=GWF2_Melainabacteria_37_15 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
mutL; putative DNA mismatch repair protein MutL
RifOxyA12_full_Melainabacteria_32_12_rifixya3_full_scaffold_728_29
unknown

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comp(28007..28072)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 29 items

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