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RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(103..1047)
DNA (945bp) protein (315aa)
Fic/DOC family protein n=1 Tax=Leptospira interrogans str. UI 12621 RepID=K6FYU5_LEPIR
Fic protein involved in cell division Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Fic family protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1178..2509
DNA (1332bp) protein (444aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Enolase (EC:4.2.1.11)
Enolase n=2 Tax=Clostridium RepID=D8GUQ9_CLOLD
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2628..3347)
DNA (720bp) protein (240aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LJW4_9BACL
ABC transporter-like protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ABC transporter-like protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3344..4189)
DNA (846bp) protein (282aa)
ABC transporter ATP-binding protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00036F0F2A
oligopeptide transport system ATP-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
oligopeptide transport ATP-binding protein OppD
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4176..4976)
DNA (801bp) protein (267aa)
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Binding-protein-dependent transport systems inner membrane component id=4342020 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
binding-protein-dependent transporters inner membrane component
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4963..5934)
DNA (972bp) protein (324aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ABC-type transporter, integral membrane subunit id=1733694 bin=GWD2_RBX1-related_39_127 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5931..7508)
DNA (1578bp) protein (526aa)
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UPI00020A99DF related cluster id=1733692 bin=GWD2_RBX1-related_39_127 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ABC transporter substrate-binding protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7512..7925)
DNA (414bp) protein (138aa)
N-terminal methylation motif domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E076_DICTD
N-terminal methylation motif domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
N-terminal methylation motif domain-containing protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7979..9073)
DNA (1095bp) protein (365aa)
MSHA biogenesis protein MshG; K12278 MSHA biogenesis protein MshG Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Type IV pilus assembly protein PilC id=3525734 bin=GWA2_Elusimicrobia_66_18 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
MSHA biogenesis protein MshG
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(9116..9667)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624DA9
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


comp(9859..11427)
DNA (1569bp) protein (523aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Methionine--tRNA ligase n=1 Tax=Clostridium thermocellum JW20 RepID=D1NQ81_CLOTM
methionyl-tRNA synthetase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11435..12544)
DNA (1110bp) protein (370aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=2009929 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12541..14019)
DNA (1479bp) protein (493aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=uncultured bacterium RepID=K2DG59_9BACT
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14103..14525)
DNA (423bp) protein (141aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3F6_FERPA
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14491..15906)
DNA (1416bp) protein (472aa)
argH; argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Argininosuccinate lyase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=ARLY_PELCD
argH; argininosuccinate lyase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(15908..17104)
DNA (1197bp) protein (399aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Argininosuccinate synthase n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UFN4_9LEPT
argininosuccinate synthase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(17104..18021)
DNA (918bp) protein (306aa)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQQ8_9FIRM
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18199..19719
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SCH7_9DELT
serine/threonine protein kinase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
serine/threonine protein kinase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19738..21057
DNA (1320bp) protein (440aa)
PASTA sensor domain-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
protein kinase n=1 Tax=Rhodococcus rhodochrous RepID=UPI00035DF7E2
PASTA sensor domain-containing serine/threonine protein kinase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21046..21711)
DNA (666bp) protein (222aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21815..22678)
DNA (864bp) protein (288aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DUH1_SULAA
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22679..24190)
DNA (1512bp) protein (504aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=SYK_CARHZ
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(24190..24375)
DNA (186bp) protein (62aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(24377..24889)
DNA (513bp) protein (171aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4566408 bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(24873..25646)
DNA (774bp) protein (258aa)
Baf family transcriptional regulator; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Type III pantothenate kinase n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=COAX_SYNWW
Baf family transcriptional regulator
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25959..26219
DNA (261bp) protein (87aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

26240..26518
DNA (279bp) protein (93aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(26525..27526)
DNA (1002bp) protein (334aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Pseudouridine synthase n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R5S1_9THEO
pseudouridine synthase, RluA family
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(27708..28781)
DNA (1074bp) protein (358aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=[Clostridium] glycolicum RepID=UPI00035E8793
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_152_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(28794..29930)
DNA (1137bp) protein (379aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPR9_9CLOT
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Displaying items 1-30 of 73 in total

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