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RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_1
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

3..305
DNA (303bp) protein (101aa)
UPF0272 protein Desku_0631 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQG5_DESK7
hypothetical protein; K09121 hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_2
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

529..1308
DNA (780bp) protein (260aa)
MotA/TolQ/ExbB proton channel; K02556 chemotaxis protein MotA Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
MotA id=4803163 bin=GWA2_Elusimicrobia_69_24 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
MotA/TolQ/ExbB proton channel
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_3
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

1313..2005
DNA (693bp) protein (231aa)
OmpA/MotB protein; K02557 chemotaxis protein MotB Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
OmpA/MotB domain protein id=3717047 bin=GWA2_Elusimicrobia_69_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
motB; Flagellar motor rotation protein MotB
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_4
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

2002..2730
DNA (729bp) protein (243aa)
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
OmpA/MotB domain protein id=2188212 bin=GWA2_Elusimicrobia_56_46 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
OmpA/MotB domain-containing protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_5
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

2727..3353
DNA (627bp) protein (209aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_6
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

3636..5237
DNA (1602bp) protein (534aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
GAF sensor signal transduction histidine kinase (EC:2.7.13.3) id=24565686 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_7
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

5254..5628
DNA (375bp) protein (125aa)
Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKR7_9DELT
two component sigma-54 specific Fis family transcriptional regulator Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
two component sigma-54 specific Fis family transcriptional regulator
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_8
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

5803..9606
DNA (3804bp) protein (1268aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Putative uncharacterized protein id=1736810 bin=GWA2_Elusimicrobia_51_34 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_9
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

9632..10003
DNA (372bp) protein (124aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Two-component hybrid sensor and regulator id=1736808 bin=GWA2_Elusimicrobia_51_34 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_10
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

10000..11460
DNA (1461bp) protein (487aa)
low affinity penicillin binding protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Tetratricopeptide TPR_1 repeat-containing protein id=1736812 bin=GWA2_Elusimicrobia_51_34 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
low affinity penicillin binding protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_11
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

11467..12798
DNA (1332bp) protein (444aa)
Protein kinase domain containing protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
hypothetical protein id=1736814 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Protein kinase domain containing protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_12
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

12795..15227
DNA (2433bp) protein (811aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
PAS/PAC sensor hybrid histidine kinase id=4060670 bin=GWF2_Lentisphaerae_50_93 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
histidine kinase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_13
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

15241..17736
DNA (2496bp) protein (832aa)
PAS/PAC sensor hybrid histidine kinase Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Putative two-component sensor kinase id=4192125 bin=GWC2_Deltaproteobacteria_55_46 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
PAS/PAC sensor hybrid histidine kinase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_14
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

17967..18284
DNA (318bp) protein (106aa)
thioredoxin ; K03671 thioredoxin 1 Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
LPBCA THIOREDOXIN id=1759404 bin=GWB2_Elusimicrobium_63_22 species=synthetic construct genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
thioredoxin
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_15
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

18274..18804
DNA (531bp) protein (177aa)
Thiol-disulfide oxidoreductase n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GK33_CALEA
thiol-disulfide oxidoreductase Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
thiol-disulfide oxidoreductase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_16
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

18804..19739
DNA (936bp) protein (312aa)
trxB2; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
trxB2; thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9J8_CARHZ
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_17
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

19739..22438
DNA (2700bp) protein (900aa)
polA-1; DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
DNA polymerase id=4306446 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
polA; DNA polymerase I
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_18
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

22435..23037
DNA (603bp) protein (201aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Thermincola potens (strain JR) RepID=D5XDW1_THEPJ
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_19
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

23176..24453
DNA (1278bp) protein (426aa)
Transcription termination factor Rho n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ16_UNCTG
transcription termination factor ; K03628 transcription termination factor Rho Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
transcription termination factor
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_20
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

24468..25271
DNA (804bp) protein (268aa)
Fused DNA-binding response regulator in twresponse regulator/sigma54 interaction protein n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3Y4Q0_9FLAO
Fis family two component sigma-54 specific transcriptional regulator Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Fis family two component sigma-54 specific transcriptional regulator
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_21
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists


25332..25670
DNA (339bp) protein (113aa)
50S ribosomal protein L31 n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZI4_UNCTG
50S ribosomal protein L31 ; K02909 large subunit ribosomal protein L31 Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
50S ribosomal protein L31
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_22
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

25883..26944
DNA (1062bp) protein (354aa)
Peptide chain release factor 1 n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=RF1_UNCTG
peptide chain release factor 1 ; K02835 peptide chain release factor 1 Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
peptide chain release factor 1
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_23
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

26953..27837
DNA (885bp) protein (295aa)
HemK; rRNA or tRNA methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Release factor glutamine methyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR89_9FIRM
HemK; rRNA or tRNA methylase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_24
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

27830..29083
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase ; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=MURA_UNCTG
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_25
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

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comp(29189..29716)
DNA (528bp) protein (176aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_26
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(29764..35994)
DNA (6231bp) protein (2077aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_27
unknown

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comp(36411..36557)
DNA (147bp) protein (49aa)

This feature has no annotations

RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2553_28
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

36610..37446
DNA (837bp) protein (279aa)
histidinol dehydrogenase ; K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Histidinol dehydrogenase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0F0_UNCTG
histidinol dehydrogenase
Displaying 28 items

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