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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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191..1144
DNA (954bp) protein (318aa)
PKD domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
putative NHL repeat containing protein id=14425775 bin=bin1_lowGC species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
PKD domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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1175..4402
DNA (3228bp) protein (1076aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=2090441 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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4474..5130
DNA (657bp) protein (219aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(5373..6104)
DNA (732bp) protein (244aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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6319..9243
DNA (2925bp) protein (975aa)
id=2121645 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=2121645 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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9342..11396
DNA (2055bp) protein (685aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003827BB9
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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11555..12871
DNA (1317bp) protein (439aa)
processing peptidase (EC:3.4.24.64) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
processing peptidase (EC:3.4.24.64)
Processing peptidase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TW36_MARTH
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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12945..14468
DNA (1524bp) protein (508aa)
Insulinase-like:Peptidase M16 n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQ96_9BACT
processing peptidase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
processing peptidase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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14662..16878
DNA (2217bp) protein (739aa)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IIJ8_9PLAN
hypothetical protein
Two-component sensor kinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16979..18022
DNA (1044bp) protein (348aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18352..18657
DNA (306bp) protein (102aa)
RNP-1 like RNA-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RNA recognition motif-containing protein id=2978179 bin=GWF2_Lentisphaerae_38_69 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
RNP-1 like RNA-binding protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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18814..19602
DNA (789bp) protein (263aa)
HlyD family secretion protein; K01993 HlyD family secretion protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Secretion protein HlyD family protein id=2726597 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
HlyD family secretion protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19648..20385
DNA (738bp) protein (246aa)
ABC transporter ATP-binding component n=1 Tax=planctomycete KSU-1 RepID=I3IR08_9PLAN
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ABC transporter-like protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_896_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20382..20813
DNA (432bp) protein (144aa)
ABC transporter, ATP-binding protein n=2 Tax=Geobacter metallireducens RepID=Q39Q03_GEOMG
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ybhF2; ABC-type multidrug transport system, ATPase c omponent
Displaying 14 items

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