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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

3..284
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003822235
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

272..634
DNA (363bp) protein (121aa)
Marine sediment metagenome DNA, contig: S06H3_S18551 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_3
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

680..1459
DNA (780bp) protein (260aa)
type 11 methyltransferase Tax=RBG_13_Planctomycetes_62_9_curated
Methyltransferase type 11 id=3261020 bin=GWC2_Nitrospirae-rel_56_14 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
type 11 methyltransferase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1534..1836
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MS61_PYRCJ
hypothetical protein
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_5
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(1860..2465)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG5X1-1 RepID=J8ABT4_BACCE
hypothetical protein Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
DNA-binding SAP domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2495..3271)
DNA (777bp) protein (259aa)
flavodoxin Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1966969 bin=GWE2_Clostridiales_32_10 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
flavodoxin
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(3277..3753)
DNA (477bp) protein (159aa)
TspO and MBR n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B3A273
benzodiazepine receptor TspO Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

3885..4454
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003487480
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4533..5273
DNA (741bp) protein (247aa)
Iron-sulfur flavoprotein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPS0_METAC
isf-8; iron-sulfur flavoprotein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
isf-8; iron-sulfur flavoprotein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5275..5892
DNA (618bp) protein (206aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5974..6603
DNA (630bp) protein (210aa)
pseudouridine synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ribosomal large subunit pseudouridine synthase E n=1 Tax=Pontibacter roseus RepID=UPI000360FCDE
pseudouridine synthase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6765..7694
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6100E
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7816..8898
DNA (1083bp) protein (361aa)
Ribosome-binding ATPase YchF n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T6M1_THEA1
GTP-binding protein YchF; K06942 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
GTP-binding protein YchF
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8961..9356
DNA (396bp) protein (132aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9340..9753
DNA (414bp) protein (138aa)
Single-stranded DNA-binding protein n=1 Tax=Lactobacillus helveticus CIRM-BIA 951 RepID=U6F5N5_LACHE
single-stranded DNA-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
single-stranded DNA-binding protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9753..10142
DNA (390bp) protein (130aa)
Single-stranded DNA-binding protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0J1_DICTD
single-strand DNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
single-strand DNA-binding protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


10158..10391
DNA (234bp) protein (78aa)
30S ribosomal protein S18 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RS18_ALKOO
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rpsR; 30S ribosomal protein S18
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


10401..10826
DNA (426bp) protein (142aa)
50S ribosomal protein L9 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S182_THEOJ
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
50S ribosomal protein L9
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10849..12177)
DNA (1329bp) protein (443aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I id=2184630 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12212..12997
DNA (786bp) protein (262aa)
AMMECR1 domain protein n=2 Tax=Desulfotomaculum RepID=F6B5T4_DESCC
AMMECR1 domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
AMMECR1 domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12990..13496
DNA (507bp) protein (169aa)
hypothetical protein; K06990 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=2213019 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13563..14615
DNA (1053bp) protein (351aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Thermincola potens (strain JR) RepID=D5XAD3_THEPJ
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14612..15733
DNA (1122bp) protein (374aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AJ74_SEBTE
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15734..16603
DNA (870bp) protein (290aa)
N-acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRB5_ACEAZ
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16634..17395)
DNA (762bp) protein (254aa)
Tetratricopeptide repeat domain-containing protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PWV8_METTM
O-linked GlcNAc transferase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
O-linked GlcNAc transferase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17561..21184)
DNA (3624bp) protein (1208aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

21443..23047
DNA (1605bp) protein (535aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(23074..24255)
DNA (1182bp) protein (394aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

24507..25187
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized protein id=2148130 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_540_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

25203..26420
DNA (1218bp) protein (406aa)
Ammonium transporter n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TFZ5_CALOO
ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ammonium transporter
Displaying items 1-30 of 35 in total

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