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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2..484)
DNA (483bp) protein (161aa)
glyceraldehyde-3-phosphate dehydrogenase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Glyceraldehyde-3-phosphate dehydrogenase id=4364724 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
glyceraldehyde-3-phosphate dehydrogenase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

626..1834
DNA (1209bp) protein (403aa)
organic solvent tolerance protein OstA Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=2009909 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
organic solvent tolerance protein OstA
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(1856..3118)
DNA (1263bp) protein (421aa)
Phosphomethylpyrimidine synthase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IRN2_THEET
phosphomethylpyrimidine synthase; K03147 thiamine biosynthesis protein ThiC Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
phosphomethylpyrimidine synthase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(3200..4273)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003797456
methicillin resistance protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
methicillin resistance protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4456..5013
DNA (558bp) protein (186aa)
glutamine amidotransferase of anthranilate synthase; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Glutamine amidotransferase of anthranilate synthase id=3426984 bin=GWF2_Nitrospirae_44_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
glutamine amidotransferase of anthranilate synthase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(5014..5784)
DNA (771bp) protein (257aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(6107..6988)
DNA (882bp) protein (294aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE (EC:2.7.1.148) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XMU1_9CLOT
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


comp(6985..7224)
DNA (240bp) protein (80aa)
30S ribosomal protein S20 n=1 Tax=Clostridium sp. CAG:768 RepID=R7HW43_9CLOT
rpsT; 30S ribosomal protein S20 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rpsT; 30S ribosomal protein S20
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7378..8238
DNA (861bp) protein (287aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=ACCD_PELCD
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8255..9229
DNA (975bp) protein (325aa)
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDG9_DEFDS
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9475..10722
DNA (1248bp) protein (416aa)
transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Transcription termination factor Rho id=1756421 bin=GWD2_RBX1-related_39_127 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
transcription termination factor Rho
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10919..11455
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B53525
thioredoxin-like protein; K03671 thioredoxin 1 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
trx-2; thioredoxin family protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


11529..11822
DNA (294bp) protein (98aa)
50S ribosomal protein L31 n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N745_DESTT
rpmE; 50S ribosomal protein L31 RpmE Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rpmE; 50S ribosomal protein L31 RpmE
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11841..12902
DNA (1062bp) protein (354aa)
Peptide chain release factor 1 n=2 Tax=Geobacillus RepID=E3IIA3_GEOS0
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
peptide chain release factor 1
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12947..13732
DNA (786bp) protein (262aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Release factor glutamine methyltransferase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZF8_CLOCD
protein-(glutamine-N5) methyltransferase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13756..14328
DNA (573bp) protein (191aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TGB0_CALNY
sua5/ycio/yrdc/ywlc family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
sua5/ycio/yrdc/ywlc family protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14363..15763)
DNA (1401bp) protein (467aa)
PPIC-type PPIASE family protein,tetratricopeptide repeat protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Peptidil-prolyl cis-trans isomerase id=1899686 bin=GWD2_RBX1-related_39_127 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
PPIC-type PPIASE family protein,tetratricopeptide repeat protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15769..16659)
DNA (891bp) protein (297aa)
cell division protein FtsX Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein; K09811 cell division transport system permease protein id=24608922 bin=RAAC11 species=Succinispira mobilis genus=Succinispira taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
cell division protein FtsX
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16659..17339)
DNA (681bp) protein (227aa)
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Cell division ATP-binding protein FtsE id=1899712 bin=GWD2_RBX1-related_39_127 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
cell division ATP-binding protein FtsE
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17397..18644)
DNA (1248bp) protein (416aa)
serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S003_THEOJ
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18837..19508)
DNA (672bp) protein (224aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(19592..20170)
DNA (579bp) protein (193aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20344..20823)
DNA (480bp) protein (160aa)
flagellar export protein FliJ Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Flagellar export protein FliJ id=1817875 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flagellar export protein FliJ
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20840..22150)
DNA (1311bp) protein (437aa)
fliI; flagellar protein export ATPase flii; K02412 flagellum-specific ATP synthase [EC:3.6.3.14] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ATPase, FliI/YscN family id=1959952 bin=GWE2_RBX1_39_32 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
fliI; flagellar protein export ATPase flii
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22151..22903)
DNA (753bp) protein (251aa)
flagellar assembly protein FliH/type III secretion system HrpE; K02411 flagellar assembly protein FliH Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
flagellar biosynthesis/type III secretory pathway protein-like protein id=1959950 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar assembly protein FliH/type III secretion system HrpE
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22903..23508)
DNA (606bp) protein (202aa)
id=1959948 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=1959948 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(23484..25115)
DNA (1632bp) protein (544aa)
Flagellar M-ring protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YI49_THEYD
fliF; flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
fliF; flagellar M-ring protein FliF
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(25184..25537)
DNA (354bp) protein (118aa)
Flagellar hook-basal body complex protein FliE Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Flagellar hook-basal body complex protein FliE id=4210419 bin=GWF2_OP9_related_35_9 species=Exiguobacterium sp. genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(25573..25995)
DNA (423bp) protein (141aa)
Flagellar basal-body rod protein FlgC n=10 Tax=Thermoanaerobacter RepID=B0K1T3_THEPX
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
flagellar basal-body rod protein FlgC
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_139_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(25999..26283)
DNA (285bp) protein (95aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Displaying items 1-30 of 73 in total

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