ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

421..1866
-----------------
DNA (1446bp)
protein (482aa)
ABC-type branched-chain amino acid transport system periplasmic subunit Tax=RBG_16_Ignavibacteria_34_14_curated
ABC-type branched-chain amino acid transport system periplasmic subunit id=3588352 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
branched chain amino acid family ABC transporter substrate-binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1879..2118
-----------------
DNA (240bp)
protein (80aa)
DNA repair protein RadC Tax=GWC2_Ignavibacteria_rel_36_12_curated
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=720622 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
DNA repair protein RadC
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2063..3310)
-----------------
DNA (1248bp)
protein (416aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1871159 bin=GWD2_Bacteroidetes_40_43 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3252..3527)
-----------------
DNA (276bp)
protein (92aa)
Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3805..4419
-----------------
DNA (615bp)
protein (205aa)
Regulatory protein TetR id=4590730 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
regulatory protein tetr Tax=GWE2_Bacteroidetes_40_63_curated
regulatory protein tetr
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4516..5550
-----------------
DNA (1035bp)
protein (345aa)
Efflux transporter, RND family, MFP subunit id=4590727 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
efflux transporter, rnd family, mfp subunit Tax=GWE2_Bacteroidetes_40_63_curated
efflux transporter, rnd family, mfp subunit
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5552..9991
-----------------
DNA (4440bp)
protein (1480aa)
acriflavin resistance protein Tax=GWE2_Bacteroidetes_40_63_curated
Acriflavin resistance protein id=1871153 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
acriflavin resistance protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10114..10368
-----------------
DNA (255bp)
protein (85aa)
id=1871152 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1871152 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10452..11225)
-----------------
DNA (774bp)
protein (258aa)
hypothetical protein
Secreted protein Tax=GWE2_Bacteroidetes_40_63_curated
Secreted protein id=1871149 bin=GWD2_Bacteroidetes_40_43 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11332..12039
-----------------
DNA (708bp)
protein (236aa)
HAD hydrolase id=4590684 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
yjjG; haloacid dehalogenase-like hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12044..13507)
-----------------
DNA (1464bp)
protein (488aa)
Trk system potassium uptake protein id=4444066 bin=GWC2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
trkH; trk system potassium uptake protein; K03498 trk system potassium uptake protein TrkH Tax=GWE2_Bacteroidetes_40_63_curated
potassium transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13535..14854)
-----------------
DNA (1320bp)
protein (440aa)
Putative uncharacterized protein id=1871108 bin=GWD2_Bacteroidetes_40_43 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
K+ transport system, NAD-binding component Tax=GWE2_Bacteroidetes_40_63_curated
K+ transport system, NAD-binding component
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15063..17144)
-----------------
DNA (2082bp)
protein (694aa)
ComEC/Rec2-related protein id=4590678 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
comec/rec2-related protein; K02238 competence protein ComEC Tax=GWE2_Bacteroidetes_40_63_curated
ComEC/rec2-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17219..17758)
-----------------
DNA (540bp)
protein (180aa)
Putative uncharacterized protein id=1871106 bin=GWD2_Bacteroidetes_40_43 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18341..18769)
-----------------
DNA (429bp)
protein (143aa)
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=GWE2_Bacteroidetes_40_63_curated
Putative Holliday junction resolvase id=1871102 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Holliday junction resolvase-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18772..20166)
-----------------
DNA (1395bp)
protein (465aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i; K01840 phosphomannomutase [EC:5.4.2.8] Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=4590670 bin=GWF2_Bacteroidetes_40_13 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
phosphoglucosamine mutase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20200..20457)
-----------------
DNA (258bp)
protein (86aa)
id=1871099 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1871099 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20862..21215)
-----------------
DNA (354bp)
protein (118aa)
id=1871097 Tax=GWE2_Bacteroidetes_40_63_curated
id=1871097 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_974_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21202..22005)
-----------------
DNA (804bp)
protein (268aa)
YD repeat protein id=4590665 bin=GWF2_Bacteroidetes_40_13 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
Displaying 19 items

View Taxonomy