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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)
id=4540375 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
id=1794445 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(315..3812)
DNA (3498bp) protein (1166aa)
PKD domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
Uncharacterized protein id=1794444 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
PKD domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4324..4521)
DNA (198bp) protein (66aa)
Stress protein, member of the CspA-family id=2896229 bin=GWC2_Bacteroidetes_40_13 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
cspA; major cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family) Tax=GWE2_Bacteroidetes_40_63_curated
cspA; major cold shock protein CspA
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4505..4837)
DNA (333bp) protein (111aa)
RNP-1 like RNA-binding protein id=4540372 bin=GWF2_Bacteroidetes_40_13 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RNP-1 like RNA-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
RNA-binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4863..5099)
DNA (237bp) protein (79aa)
RNP-1 like RNA-binding protein id=1794440 bin=GWD2_Bacteroidetes_40_43 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RNP-1 like RNA-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
RNA-binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5248..5562)
DNA (315bp) protein (105aa)
hypothetical protein
Chromosome undetermined scaffold_41, whole genome shotgun sequence id=1794439 bin=GWD2_Bacteroidetes_40_43 species=Paramecium tetraurelia genus=Paramecium taxon_order=Peniculida taxon_class=Oligohymenophorea phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Chromosome undetermined scaffold_41, whole genome shotgun sequence Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5751..6563
DNA (813bp) protein (271aa)
Membrane complex biogenesis protein, BtpA family protein id=1794438 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Entamoeba taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
2.t00001; hypothetical protein; K06971 Tax=GWE2_Bacteroidetes_40_63_curated
BtpA family membrane complex biogenesis protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6615..7556)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family id=4540368 bin=GWF2_Bacteroidetes_40_13 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator Tax=GWE2_Bacteroidetes_40_63_curated
LysR family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7714..10569)
DNA (2856bp) protein (952aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein AnHS1_08986 id=1794436 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10554..11117)
DNA (564bp) protein (188aa)
Nitroreductase id=1794435 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
nitroreductase Tax=GWE2_Bacteroidetes_40_63_curated
nitroreductase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11639..12829)
DNA (1191bp) protein (397aa)
MORN variant repeat protein id=4540365 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12888..13691)
DNA (804bp) protein (268aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Hypothetical conserved protein id=1794433 bin=GWD2_Bacteroidetes_40_43 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13869..15794
DNA (1926bp) protein (642aa)
Stage II sporulation protein E (SpoIIE) Tax=GWE2_Bacteroidetes_40_63_curated
Stage II sporulation protein E (SpoIIE) id=4540363 bin=GWF2_Bacteroidetes_40_13 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Stage II sporulation protein E (SpoIIE)
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15939..16496
DNA (558bp) protein (186aa)
id=1794430 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1794430 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16587..17111
DNA (525bp) protein (175aa)
id=1794429 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1794429 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17113..20664
DNA (3552bp) protein (1184aa)
tpn50; OmpA family outer membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
Outer membrane protein, OmpA family id=4540360 bin=GWF2_Bacteroidetes_40_13 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20761..22119)
DNA (1359bp) protein (453aa)
TAP domain protein id=1794371 bin=GWD2_Bacteroidetes_40_43 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hydrolase Tax=GWE2_Bacteroidetes_40_63_curated
hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22127..22501)
DNA (375bp) protein (125aa)
hypothetical protein AtheD1_08098 id=1794368 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22607..23854)
DNA (1248bp) protein (416aa)
Putative uncharacterized protein id=1794365 bin=GWD2_Bacteroidetes_40_43 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
peptidase family M48 Tax=GWE2_Bacteroidetes_40_63_curated
peptidase family M48
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23847..24869)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein id=1794362 bin=GWD2_Bacteroidetes_40_43 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24883..26844)
DNA (1962bp) protein (654aa)
Putative uncharacterized protein id=4540355 bin=GWF2_Bacteroidetes_40_13 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27101..27847)
DNA (747bp) protein (249aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWE2_Bacteroidetes_40_63_curated
3-oxoacyl-[acyl-carrier-protein] reductase id=4058404 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
3-ketoacyl-ACP reductase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27971..30508)
DNA (2538bp) protein (846aa)
signal transduction histidine kinase with CheB and CheR activity (EC:2.1.1.80 3.1.1.61); K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] Tax=GWE2_Bacter
signal transduction histidine kinase with CheB and CheR activity id=1794354 bin=GWD2_Bacteroidetes_40_43 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30712..32148
DNA (1437bp) protein (479aa)
alkyl hydroperoxide reductase id=1794352 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
thiol-disulfide isomerase Tax=GWE2_Bacteroidetes_40_63_curated
thiol-disulfide isomerase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32288..32491)
DNA (204bp) protein (68aa)
id=1794351 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1794351 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32520..33530)
DNA (1011bp) protein (337aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=GWE2_Bacteroidetes_40_63_curated
Iron-chelate-transporting ATPase id=1794349 bin=GWD2_Bacteroidetes_40_43 species=Fischerella sp. JSC-11 genus=Fischerella taxon_order=Stigonematales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ABC transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33532..34569)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein id=4540284 bin=GWF2_Bacteroidetes_40_13 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Fe3+-siderophore ABC transporter permease Tax=GWE2_Bacteroidetes_40_63_curated
Vitamin B12 ABC transporter permease component BtuC
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34566..35054)
DNA (489bp) protein (163aa)
GCN5-related N-acetyltransferase id=1794345 bin=GWD2_Bacteroidetes_40_43 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
GCN5-like N-acetyltransferase Tax=GWE2_Bacteroidetes_40_63_curated
N-acetyltransferase GCN5
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35078..36211)
DNA (1134bp) protein (378aa)
Periplasmic binding protein id=1794343 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
periplasmic binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_168_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36214..40239)
DNA (4026bp) protein (1342aa)
Tetratricopeptide repeat containing protein, exported id=1794341 bin=GWD2_Bacteroidetes_40_43 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
Displaying items 1-30 of 77 in total

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