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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(160..570)
DNA (411bp) protein (137aa)
Uncharacterized protein id=1984682 bin=GWE2_Bacteroidetes_40_63 species=Eubacterium plexicaudatum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
Hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(581..1636)
DNA (1056bp) protein (352aa)
id=1984681 bin=GWE2_Bacteroidetes_40_63 species=Eubacterium plexicaudatum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
id=1984681 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1647..3074)
DNA (1428bp) protein (476aa)
id=1984680 bin=GWE2_Bacteroidetes_40_63 species=Eubacterium plexicaudatum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
id=1984680 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3266..4771)
DNA (1506bp) protein (502aa)
WD-40 repeat-containing serine/threonine protein kinase id=1984679 bin=GWE2_Bacteroidetes_40_63 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
WD-40 repeat-containing serine/threonine protein kinase Tax=GWE2_Bacteroidetes_40_63_curated
WD-40 repeat-containing serine/threonine protein kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5606..5962
DNA (357bp) protein (119aa)
Uncharacterized protein id=2057026 bin=GWA2_Bacteroidetes_40_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
translation initiation factor SUI1; K03113 translation initiation factor 1 Tax=GWE2_Bacteroidetes_40_63_curated
putative translation initiation factor SUI1
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5975..8917
DNA (2943bp) protein (981aa)
SNF2-related protein Tax=GWE2_Bacteroidetes_40_63_curated
SNF2-like protein id=1930104 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
helicase SNF2
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9083..10735
DNA (1653bp) protein (551aa)
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family Tax=GWE2_Bacteroidetes_40_63_curated
Amino acid carrier protein id=4635439 bin=GWF2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
amino acid carrier protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10849..11766
DNA (918bp) protein (306aa)
DNA uptake protein id=1930085 bin=GWD2_Bacteroidetes_40_43 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
DNA uptake protein Tax=GWE2_Bacteroidetes_40_63_curated
DNA uptake protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11752..13206)
DNA (1455bp) protein (485aa)
MATE efflux family protein id=1930083 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
MATE efflux family protein Tax=GWE2_Bacteroidetes_40_63_curated
multidrug transporter MatE
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13214..13429
DNA (216bp) protein (72aa)
id=1930082 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1930082 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13580..13777
DNA (198bp) protein (66aa)
30S ribosomal protein S21 id=4044147 bin=GWC2_Bacteroidetes_40_13 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=GWE2_Bacteroidetes_40_63_curated
rpsU; 30S ribosomal protein S21
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13837..14715
DNA (879bp) protein (293aa)
Tyrosine recombinase XerC id=1930077 bin=GWD2_Bacteroidetes_40_43 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
site-specific recombinase XerD; K03733 integrase/recombinase XerC Tax=GWE2_Bacteroidetes_40_63_curated
recombinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14731..15027
DNA (297bp) protein (99aa)
Ribosomal subunit interface protein id=1930075 bin=GWD2_Bacteroidetes_40_43 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ribosomal subunit interface protein; K05808 putative sigma-54 modulation protein Tax=GWE2_Bacteroidetes_40_63_curated
ribosomal subunit interface protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15795..16982
DNA (1188bp) protein (396aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=GWE2_Bacteroidetes_40_63_curated
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu id=4044069 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17122..17316
DNA (195bp) protein (65aa)
preprotein translocase, SecE subunit id=1930066 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
preprotein translocase, SecE subunit; K03073 preprotein translocase subunit SecE Tax=GWE2_Bacteroidetes_40_63_curated
elongation factor Tu
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17332..17865
DNA (534bp) protein (178aa)
Transcription antitermination protein nusG id=4044062 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG Tax=GWE2_Bacteroidetes_40_63_curated
antitermination protein NusG
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17876..18319
DNA (444bp) protein (148aa)
50S ribosomal protein L11 id=4635351 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=GWE2_Bacteroidetes_40_63_curated
rplK; 50S ribosomal protein L11
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18340..19035
DNA (696bp) protein (232aa)
50S ribosomal protein L1 id=4044054 bin=GWC2_Bacteroidetes_40_13 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=GWE2_Bacteroidetes_40_63_curated
rplA; 50S ribosomal protein L1
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19048..19563
DNA (516bp) protein (172aa)
Putative uncharacterized protein id=4044049 bin=GWC2_Bacteroidetes_40_13 species=Alloprevotella rava genus=Alloprevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
LSU ribosomal protein l10p; K02864 large subunit ribosomal protein L10 Tax=GWE2_Bacteroidetes_40_63_curated
rplJ; 50S ribosomal protein L10
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19606..19983
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 id=4635345 bin=GWF2_Bacteroidetes_40_13 species=Gillisia marina genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=GWE2_Bacteroidetes_40_63_curated
50S ribosomal protein L7/L12
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20081..23893
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWE2_Bacteroidetes_40_63_curated
DNA-directed RNA polymerase subunit beta id=4044043 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
DNA-directed RNA polymerase subunit beta
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23956..28224
DNA (4269bp) protein (1423aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=GWE2_Bacteroidetes_40_63_curated
rpoC; putative DNA-directed RNA polymerase beta' chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' id=4635341 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28345..28668
DNA (324bp) protein (108aa)
Putative uncharacterized protein id=1930042 bin=GWD2_Bacteroidetes_40_43 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28812..29639
DNA (828bp) protein (276aa)
id=1930040 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1930040 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29847..32183
DNA (2337bp) protein (779aa)
pkd domain containing protein Tax=GWE2_Bacteroidetes_40_63_curated
PKD domain containing protein id=1984609 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
pkd domain containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32313..34319
DNA (2007bp) protein (669aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=GWE2_Bacteroidetes_40_63_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase id=1930034 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34384..34785
DNA (402bp) protein (134aa)
id=1930033 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1930033 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34782..35111)
DNA (330bp) protein (110aa)
thiol-disulfide isomerase and thioredoxins id=1930000 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
thioredoxin Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35120..35605)
DNA (486bp) protein (162aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) Tax=GWE2_Bacteroidetes_40_63_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase id=4635329 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_308_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35610..36827)
DNA (1218bp) protein (406aa)
hypothetical protein AnHS1_05022 id=1929997 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
membrane protein
Displaying items 1-30 of 36 in total

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