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RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1..204)
DNA (204bp) protein (68aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L912_9DELT id=73338 bin=ACD51 species=Desulfovibrio sp. FW1012B genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Putative uncharacterized protein (Fragment) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(286..1671)
DNA (1386bp) protein (462aa)
seg 146..158 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
seg 146..158 id=73332 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1821..2177
DNA (357bp) protein (119aa)
phnA; alkylphosphonate utilization operon protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Alkylphosphonate utilization operon protein n=1 Tax=uncultured bacterium PF3_9BACT">RepID=K2APF3_9BACT
PhnA protein
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2354..2779)
DNA (426bp) protein (142aa)
transmembrane_regions 12..29 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
transmembrane_regions 12..29 id=73346 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

2972..3280
DNA (309bp) protein (103aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3361..4428)
DNA (1068bp) protein (356aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=73345 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
myo-inositol-1-phosphate synthase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
myo-inositol-1-phosphate synthase
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4606..4947)
DNA (342bp) protein (114aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=73335 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5294..5767)
DNA (474bp) protein (158aa)
hypothetical protein id=73336 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5983..6357)
DNA (375bp) protein (125aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6645..7151)
DNA (507bp) protein (169aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7569..10682)
DNA (3114bp) protein (1038aa)
type I restriction-modification system restriction subunit (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
type I restriction-modification system restriction subunit (EC:3.1.21.3)
Type I restriction-modification system restriction subunit n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV05_SYNAS
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10679..11569)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZAU2_ROSLO
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11572..12816)
DNA (1245bp) protein (415aa)
hsdS1; type I site-specific restriction-modification system, S (specificity) subunit (EC:3.1.21.3); K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hsdS1; type I site-specific restriction-modification system, S (specificity) subunit (EC:3.1.21.3)
Type I site-specific restriction-modification system, S n=1 Tax=Listeria innocua FSL S4-378 RepID=E3YZX7_LISIO
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12819..14363)
DNA (1545bp) protein (515aa)
type I restriction-modification system methylation subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Type I restriction-modification system methylation subunit id=1772081 bin=GWE2_Gammaproteobacteria_37_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
type I restriction-modification system methylation subunit
RIFOXYC2_FULL_CP_41_25_rifoxyc2_full_scaffold_3769_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14393..14581)
DNA (189bp) protein (63aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Displaying 15 items

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