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RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_1
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..4476)
DNA (4476bp) protein (1492aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein (Fragment) id=1899394 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5161..5913)
DNA (753bp) protein (251aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Exodeoxyribonuclease III id=1743907 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
exodeoxyribonuclease III Xth
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5888..6004)
DNA (117bp) protein (39aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6004..6153)
DNA (150bp) protein (50aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6204..6845
DNA (642bp) protein (214aa)
DSBA oxidoreductase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
DSBA oxidoreductase id=1743910 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DSBA oxidoreductase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6971..7513
DNA (543bp) protein (181aa)
pyruvate/ketoisovalerate oxidoreductase common subunit gamma; K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC:1.2.7.1)
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit id=1743911 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_7
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

7621..7878
DNA (258bp) protein (86aa)
porD; pyuvate ferredoxin oxidoreductase subunit delta (EC:1.2.7.1); K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
porD; pyuvate ferredoxin oxidoreductase subunit delta (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, delta subunit id=1743912 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_8
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


8070..8315
DNA (246bp) protein (82aa)
30S ribosomal protein S23 n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B799A1
S23 ribosomal protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_9
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

8332..9540
DNA (1209bp) protein (403aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Pyruvate ferredoxin oxidoreductase alpha subunit id=1743914 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9825..10643
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Uncharacterized protein id=1743917 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_11
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10624..10872
DNA (249bp) protein (83aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_12
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10966..11175
DNA (210bp) protein (70aa)
id=1743920 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1743920 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_13
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11395..12303
DNA (909bp) protein (303aa)
pyruvate synthase beta chain; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Pyruvate oxidoreductase subunit beta id=1743921 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
pyruvate synthase beta chain
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_14
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12480..16457)
DNA (3978bp) protein (1326aa)
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=1743922 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_15
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16580..20026)
DNA (3447bp) protein (1149aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
DNA-directed RNA polymerase subunit beta id=1743923 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DNA-directed RNA polymerase subunit beta
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_16
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20498..21883)
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003787910
UDP-N-acetylmuramyl-tripeptide synthetase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21940..22923)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037DDD51
methicillin resistance protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
methicillin resistance protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_18
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22995..23618)
DNA (624bp) protein (208aa)
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12) Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction DNA helicase, subunit A id=1743930 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_19
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23737..24090
DNA (354bp) protein (118aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_20
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24091..25416)
DNA (1326bp) protein (442aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Peptidase U32 id=1743932 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
peptidase U32
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_21
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

25448..25666
DNA (219bp) protein (73aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25677..26498)
DNA (822bp) protein (274aa)
response regulator receiver protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Two-component sensor kinase id=1743936 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_23
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(26564..28462)
DNA (1899bp) protein (633aa)
multi-sensor signal transduction histidine kinase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Multi-sensor signal transduction histidine kinase id=1743941 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
multi-sensor signal transduction histidine kinase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_24
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(28567..29982)
DNA (1416bp) protein (472aa)
M18 family aminopeptidase n=1 Tax=Clostridium sp. CAG:575 RepID=R6H3T2_9CLOT
peptidase M18 aminopeptidase I Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
peptidase M18 aminopeptidase I
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_25
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(30099..30755)
DNA (657bp) protein (219aa)
hypothetical protein; K06997 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein AtheD1_13343 id=3596258 bin=GWF2_Bacteroidetes_33_16 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_26
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(30760..30996)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003646862
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_27
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(31002..31214)
DNA (213bp) protein (71aa)
id=3423636 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=3423636 bin=GWA1_ZB2_49_26 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_28
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(31295..32215)
DNA (921bp) protein (307aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Protease HtpX homolog id=1744000 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Zn-dependent protease with chaperone function
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_29
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

32313..32627
DNA (315bp) protein (105aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=uncultured bacterium RepID=K1ZVH1_9BACT
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
nucleotide pyrophosphohydrolase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_327_30
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

32624..33433
DNA (810bp) protein (270aa)
murI; glutamate racemase MurI (EC:5.1.1.3) Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
murI; glutamate racemase MurI (EC:5.1.1.3)
Glutamate racemase id=2157427 bin=GWD2_Bacteroidetes_33_33 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
Displaying items 1-30 of 44 in total

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