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RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_1
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

1..588
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FDH0_9BACT
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Tax=GWA2_OD1_38_27
MiaB family RNA modification protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_2
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

596..1351
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FFBA5
tRNA dimethylallyltransferase Tax=GWA2_OD1_38_27
tRNA delta(2)-isopentenylpyrophosphate transferase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_3
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(1424..3013)
DNA (1590bp) protein (530aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=uncultured bacterium RepID=K2F1M4_9BACT
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000313|EMBL:KKQ67814.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_4
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(3010..3501)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371E8C2
Dihydrofolate reductase {ECO:0000313|EMBL:KKQ67813.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
dihydrofolate reductase subunit
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_5
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(3791..3994)
DNA (204bp) protein (68aa)
thyA; thymidylate synthase (EC:2.1.1.45)
thymidylate synthase n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037765D8
Thymidylate synthase Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_6
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(4089..4814)
DNA (726bp) protein (242aa)
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
Thymidylate kinase {ECO:0000313|EMBL:KKQ67811.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
Thymidylate kinase id=1987545 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_7
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(4818..5357)
DNA (540bp) protein (180aa)
Deoxycytidine deaminase {ECO:0000313|EMBL:KKQ67810.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
Deoxycytidine deaminase id=3422918 bin=GWA1_ZB2_49_26 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
dcd2; deoxycytidine deaminase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_8
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(5382..6368)
DNA (987bp) protein (329aa)
Thymidylate synthase n=1 Tax=uncultured bacterium RepID=K2EZR0_9BACT
Thymidylate synthase {ECO:0000313|EMBL:KKQ67809.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_9

Not on your lists

comp(6370..6942)
DNA (573bp) protein (191aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:KKQ97662.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
Deoxycytidine triphosphate deaminase id=3422927 bin=GWA1_ZB2_49_26 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_10
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists


comp(7036..7458)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F6758
50S ribosomal protein L11 {ECO:0000313|EMBL:KKQ67807.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
rplK; 50S ribosomal protein L11
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_11
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(7549..8094)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380871C
Transcription antitermination protein nusG Tax=GWA2_OD1_38_27
nusG; transcription antitermination factor
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_12
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(8107..8310)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368D926
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:KKQ67805.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
preprotein translocase, SecE subunit
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_13
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

8643..8999
DNA (357bp) protein (119aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_14
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(9122..12394)
DNA (3273bp) protein (1091aa)
DNA gyrase subunit B n=1 Tax=uncultured bacterium RepID=K1Z9K4_9BACT
Gyrase subunit B protein {ECO:0000313|EMBL:KKQ67803.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
gyrB; DNA gyrase B subunit
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_15
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(12674..12880)
DNA (207bp) protein (69aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_16
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(12916..13947)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_17

Not on your lists

14157..15167
DNA (1011bp) protein (337aa)
Transposase {ECO:0000313|EMBL:KKQ98045.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
lbf:LBF_2982 IS30 family transposase id=95996 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transposase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_18

Not on your lists

15475..16365
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ98046.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
resolvase domain-containing protein id=5094973 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_trna_2
unknown

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comp(16327..16401)
DNA (75bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_19

Not on your lists

comp(16560..16958)
DNA (399bp) protein (133aa)
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel {ECO:0000313|EMBL:KKQ98047.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW201
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel id=4252684 bin=GWC2_Bacteroidetes_40_22 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
mechanosensitive ion channel protein MscS
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_20

Not on your lists

comp(16955..17416)
DNA (462bp) protein (154aa)
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel {ECO:0000313|EMBL:KKQ98048.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW201
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel id=4379158 bin=GWA2_Bacteroidetes_A19_40_15 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_trna_1
unknown

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comp(17516..17586)
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_21
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(17566..18264)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XFI6_STRVR id=42818 bin=ACD37 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_22
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(18542..19087)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003744795
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_23

Not on your lists

comp(19077..20516)
DNA (1440bp) protein (480aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363B069
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKQ98051.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_24
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(20834..21136)
DNA (303bp) protein (101aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E67FD
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_25
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(21273..22325)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037AFFFA
Rod shape-determining protein MreB {ECO:0000313|EMBL:KKQ68055.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
rod shape-determining protein MreB
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_26
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists


comp(22427..23710)
DNA (1284bp) protein (428aa)
proS; Proline--tRNA ligase (EC:6.1.1.15)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363620D
Prolyl-tRNA synthetase Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_27

Not on your lists

comp(23813..24892)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000361B477
Membrane-associated zinc metalloprotease {ECO:0000313|EMBL:KKQ98055.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
membrane protein of unknown function
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_3555_28
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(25078..25638)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000375F470
Ribosome-recycling factor Frr {ECO:0000313|EMBL:KKQ68058.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
frr; ribosome-recycling factor Frr
Displaying items 1-30 of 56 in total

View Taxonomy