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RBG_13_scaffold_27042_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_27042_curated_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..660)
DNA (660bp) protein (220aa)
nitrate reductase (EC:1.7.99.4)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI0003640BED
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(760..1356)
DNA (597bp) protein (199aa)
oxidoreductase n=1 Tax=Desulfitobacterium hafniense RepID=UPI00035D5BCE
oxidoreductase membrane subunit
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_3
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1659..2261)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035EE745
oxidoreductase iron-sulfur subunit; K08358 tetrathionate reductase subunit B
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_4
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2520..2840)
DNA (321bp) protein (107aa)
H+transporting two-sector ATPase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
F-type H+-transporting ATPase subunit a n=1 Tax=uncultured prokaryote RepID=H5SPA5_9ZZZZ
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_5
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3012..3725)
DNA (714bp) protein (238aa)
atpB-1; ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
F-type H+-transporting ATPase subunit a n=1 Tax=uncultured prokaryote RepID=H5SPA4_9ZZZZ
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3725..4141)
DNA (417bp) protein (139aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_7
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4116..4364)
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=4342523 bin=GWC2_Deltaproteobacteria_66_88 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_8
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4554..5768)
DNA (1215bp) protein (405aa)
glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
Glutamate-1-semialdehyde 2,1-aminomutase id=4285684 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_9
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5936..6421)
DNA (486bp) protein (162aa)
Transcriptional regulator n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F7B9_DESDL
transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6726..7082
DNA (357bp) protein (119aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit A id=2886575 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_11
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7073..7549
DNA (477bp) protein (159aa)
NAD(P)H-quinone oxidoreductase subunit K (EC:1.6.5.3 1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit B n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJZ9_DESAR
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_12
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7556..8011
DNA (456bp) protein (152aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit C id=3648240 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_13
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8039..9211
DNA (1173bp) protein (391aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit D id=2826282 bin=GWC2_Syntrophus__56_31 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9230..9574
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4879F
DRTGG domain-containing protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_15
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9470..9772)
DNA (303bp) protein (101aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_16
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9879..10130
DNA (252bp) protein (84aa)
Histidine kinase id=3426618 bin=GWF2_Nitrospirae_44_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
histidine kinase
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_17
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10166..10669
DNA (504bp) protein (168aa)
NADH:ubiquinone oxidoreductase 24 kD subunit id=4895727 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
NADH:ubiquinone oxidoreductase 24 kD subunit
Tax=RBG_13_Deltaproteobacteria_51_10_curated
RBG_13_scaffold_27042_curated_18
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10700..10867
DNA (168bp) protein (56aa)
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein id=4569255 bin=GWF2_Syntrophobacterales_56_9 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
ferredoxin
Tax=RBG_13_Deltaproteobacteria_51_10_curated
Displaying 18 items

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