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RBG_13_OP3_44_8_RBG_13_scaffold_7261

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_7261_1
unknown

Not on your lists

comp(1..198)
DNA (198bp) protein (66aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_2
unknown

Not on your lists

397..627
DNA (231bp) protein (77aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_3
unknown

Not on your lists

comp(1139..1387)
DNA (249bp) protein (83aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_4
unknown

Not on your lists

comp(1987..2157)
DNA (171bp) protein (57aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_5
unknown

Not on your lists

2488..2832
DNA (345bp) protein (115aa)
Multi-sensor hybrid histidine kinase id=4202907 bin=GWF2_OP3_43_52 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_7261_6
unknown

Not on your lists

2835..4334
DNA (1500bp) protein (500aa)
Putative uncharacterized protein id=4202905 bin=GWF2_OP3_43_52 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GAF sensor signal transduction histidine kinase
RBG_13_OP3_44_8_RBG_13_scaffold_7261_7
unknown

Not on your lists

4350..5285
DNA (936bp) protein (312aa)
Response regulator receiver modulated diguanylate cyclase id=4202903 bin=GWF2_OP3_43_52 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
response regulator receiver modulated diguanylate cyclase
RBG_13_OP3_44_8_RBG_13_scaffold_7261_8
unknown

Not on your lists

comp(6397..6771)
DNA (375bp) protein (125aa)
Two-component response regulator id=2766845 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
response regulator
RBG_13_OP3_44_8_RBG_13_scaffold_7261_9
unknown

Not on your lists

comp(6771..7208)
DNA (438bp) protein (146aa)
hypothetical protein id=14425846 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_7261_10
unknown

Not on your lists

comp(7332..8069)
DNA (738bp) protein (246aa)
AraC family transcriptional regulator id=3241549 bin=GWC2_Elusimicrobia_51_8 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
two component transcriptional regulator, AraC family
RBG_13_OP3_44_8_RBG_13_scaffold_7261_11
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8207..8647
DNA (441bp) protein (147aa)
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5SCR7_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53953.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
OmpA family protein
RBG_13_OP3_44_8_RBG_13_scaffold_7261_12
unknown

Not on your lists

8802..9209
DNA (408bp) protein (136aa)
General secretion pathway protein G id=2918663 bin=GWC2_Planctomycete_KSU_39_26 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
general secretion pathway protein G; K02456 general secretion pathway protein G
RBG_13_OP3_44_8_RBG_13_scaffold_7261_13
unknown

Not on your lists

comp(9249..10598)
DNA (1350bp) protein (450aa)
Uncharacterized protein id=3858323 bin=GWF2_OP3_38_59 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
radical SAM family protein
RBG_13_OP3_44_8_RBG_13_scaffold_7261_14
unknown

Not on your lists

11053..11736
DNA (684bp) protein (228aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_15
unknown

Not on your lists

comp(11714..12370)
DNA (657bp) protein (219aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_16

Not on your lists

comp(12586..13644)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037637C8
Marine sediment metagenome DNA, contig: S01H1_L07019 {ECO:0000313|EMBL:GAF67531.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_7261_17
unknown

Not on your lists

comp(13699..14070)
DNA (372bp) protein (124aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_18
unknown

Not on your lists

comp(14688..14945)
DNA (258bp) protein (86aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_19
unknown

Not on your lists

16133..16240
DNA (108bp) protein (36aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_20
unknown

Not on your lists

comp(16537..17463)
DNA (927bp) protein (309aa)
Type II secretion system protein E id=1916909 bin=GWB2_CP_45_9 species=Caldicellulosiruptor hydrothermalis genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
pilB; type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB
RBG_13_OP3_44_8_RBG_13_scaffold_7261_21
unknown

Not on your lists

comp(17508..18830)
DNA (1323bp) protein (441aa)
Uncharacterized protein id=3858323 bin=GWF2_OP3_38_59 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
radical SAM family protein
RBG_13_OP3_44_8_RBG_13_scaffold_7261_22
unknown

Not on your lists

comp(18865..19101)
DNA (237bp) protein (79aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_23
unknown

Not on your lists

comp(19103..20638)
DNA (1536bp) protein (512aa)
Hypothetical conserved protein id=5028975 bin=GWA2_OP3_53_43 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_7261_24
unknown

Not on your lists

21282..21590
DNA (309bp) protein (103aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_25
unknown

Not on your lists

comp(21547..21747)
DNA (201bp) protein (67aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_7261_26
unknown

Not on your lists

comp(21751..22176)
DNA (426bp) protein (142aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase id=4202776 bin=GWF2_OP3_43_52 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_7261_27
unknown

Not on your lists

comp(23046..23576)
DNA (531bp) protein (177aa)
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) subunit gamma; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003601E80
RBG_13_OP3_44_8_RBG_13_scaffold_7261_28
unknown

Not on your lists

comp(23573..24301)
DNA (729bp) protein (243aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoglutarate synthase beta subunit id=4202772 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_7261_29
unknown

Not on your lists

comp(24312..25370)
DNA (1059bp) protein (353aa)
2-ketoisovalerate ferredoxin reductase (EC:1.2.7.7); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein id=2273111 bin=GWB2_CP_45_9 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_7261_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25367..25570)
DNA (204bp) protein (68aa)
formate hydrogenlyase subunit 6 (EC:1.2.7.3)
4Fe-4S binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD65_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS10417.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Displaying items 1-30 of 31 in total

View Taxonomy