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31_018_scaffold_142

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
31_018_scaffold_142_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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270..824
DNA (555bp) protein (185aa)
Bacterial transferase hexapeptide domain protein n=42 Tax=Klebsiella pneumoniae RepID=G8W273_KLEPH
transferase hexapeptide domain protein
Uncharacterized protein {ECO:0000313|EMBL:AIA44091.1}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
31_018_scaffold_142_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(800..1057)
DNA (258bp) protein (86aa)
Uncharacterized protein n=131 Tax=Bacteria RepID=G8W274_KLEPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA44092.1}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
31_018_scaffold_142_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1054..1872)
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1267512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae B5055.;"
Shikimate dehydrogenase n=123 Tax=Bacteria RepID=A6TET5_KLEP7
shikimate 5-dehydrogenase
31_018_scaffold_142_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1876..2448)
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1432554 sp
Threonylcarbamoyl-AMP synthase n=124 Tax=Bacteria RepID=TSAC_KLEP7
YrdC subfamily protein
31_018_scaffold_142_5
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2453..2995)
DNA (543bp) protein (181aa)
Klebsiella pneumoniae subsp. rhinoscleromatis strain SB3432, complete genome n=139 Tax=Bacteria RepID=R4YG43_KLEPN
putative DNA topoisomerase
DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:ADC56350.1}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
31_018_scaffold_142_6
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3021..3494)
DNA (474bp) protein (158aa)
Protein Smg n=140 Tax=Bacteria RepID=G0GKI3_KLEPN
smg; hypothetical protein
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
31_018_scaffold_142_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3466..4590)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=108 Tax=Enterobacteriaceae RepID=G0GKI4_KLEPN
Rossmann fold nucleotide-binding protein Smf
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake {ECO:0000313|EMBL:CDK63356.1}; TaxID=1411646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS10.;"
31_018_scaffold_142_8
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4719..5228
DNA (510bp) protein (170aa)
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; Short=PDF {ECO:0000255|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000255|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; TaxID=272620 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH; 78578).;"
Peptide deformylase n=30 Tax=Klebsiella RepID=DEF_KLEP7
31_018_scaffold_142_9
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5243..6190
DNA (948bp) protein (316aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1420012 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae 30660/NJST258_1.;"
Methionyl-tRNA formyltransferase n=85 Tax=Klebsiella pneumoniae RepID=G8W281_KLEPH
31_018_scaffold_142_10
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6243..7538
DNA (1296bp) protein (432aa)
RNA methyltransferase Sun; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rRNA m5C967 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01856}; rRNA (cytosine-C(5)-)-methyltransferase RsmB {ECO:0000256|HAMAP-Rule:MF_01856}; TaxID=1411646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS10.;"
Ribosomal RNA small subunit methyltransferase B n=85 Tax=Klebsiella pneumoniae RepID=G8W282_KLEPH
31_018_scaffold_142_11
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7552..8928
DNA (1377bp) protein (459aa)
Potassium transporter peripheral membrane component n=143 Tax=Bacteria RepID=A6TEU3_KLEP7
trkA; potassium transporter peripheral membrane protein
Potassium transporter peripheral membrane protein {ECO:0000313|EMBL:ERE46467.1}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12.;"
31_018_scaffold_142_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9069..9482
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=147 Tax=Bacteria RepID=MSCL_KLEP3
mscL; hypothetical protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1432560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC56.;"
31_018_scaffold_142_13
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9418..9696)
DNA (279bp) protein (93aa)
YhdL protein n=82 Tax=Klebsiella RepID=R4YFT4_KLEPN
putative cytoplasmic protein; K09890 alternative ribosome-rescue factor
Alternative ribosome-rescue factor A {ECO:0000313|EMBL:AIT00688.1}; ArfA protein {ECO:0000313|EMBL:CEN65584.1}; YhdL protein {ECO:0000313|EMBL:CCI79101.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
31_018_scaffold_142_14
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9754..10179)
DNA (426bp) protein (142aa)
Zinc-responsive transcriptional regulator n=100 Tax=Klebsiella pneumoniae RepID=G8W285_KLEPH
zntR; zinc-responsive transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CDK63377.1}; TaxID=1411646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS10.;"
31_018_scaffold_142_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10182..10550)
DNA (369bp) protein (123aa)
Uncharacterized protein n=125 Tax=Bacteria RepID=G0GKJ3_KLEPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPF42413.1}; TaxID=1267512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae B5055.;"
31_018_scaffold_142_16
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10659..11045)
DNA (387bp) protein (129aa)
50S ribosomal protein L17 n=150 Tax=Bacteria RepID=RL17_KLEP3
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
31_018_scaffold_142_17
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11086..12075)
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1463164 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. 07A044.;"
DNA-directed RNA polymerase subunit alpha n=242 Tax=Bacteria RepID=RPOA_ENT38
31_018_scaffold_142_18
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12101..12721)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=88 Tax=Enterobacteriaceae RepID=RS4_KLEP3
ribosomal protein S4, bacterial/organelle type
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
31_018_scaffold_142_19
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12755..13144)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=130 Tax=Bacteria RepID=RS11_ERWCT
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1398204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. kraussei Becker Underwood.;"
31_018_scaffold_142_20
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13161..13517)
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=145 Tax=Bacteria RepID=RS13_KLEP3
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1276653 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae 700603.;"
31_018_scaffold_142_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13664..13780)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 1 n=1875 Tax=Enterobacteriaceae RepID=RL361_CROS8
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
31_018_scaffold_142_22
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13814..15145)
DNA (1332bp) protein (444aa)
Preprotein translocase subunit SecY n=138 Tax=Bacteria RepID=G0GKJ9_KLEPN
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1463165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. 18A069.;"
31_018_scaffold_142_23
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15153..15587)
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=146 Tax=Bacteria RepID=RL15_KLEP3
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
31_018_scaffold_142_24
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15591..15770)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=768 Tax=Bacteria RepID=RL30_CITK8
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1192688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Dublin str. UC16.;"
31_018_scaffold_142_25
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15774..16277)
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=140 Tax=Bacteria RepID=RS5_KLEP7
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1328397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCICRE 14.;"
31_018_scaffold_142_26
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16292..16645)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1600 Tax=Bacteria RepID=RL18_CITK8
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
31_018_scaffold_142_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16655..17188)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=138 Tax=Bacteria RepID=RL6_KLEP7
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1432560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC56.;"
31_018_scaffold_142_28
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17201..17593)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=140 Tax=Bacteria RepID=RS8_KLEP7
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1420012 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae 30660/NJST258_1.;"
31_018_scaffold_142_29
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17627..17932)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=162 Tax=Bacteria RepID=RS14_KLEP3
rpsN; hypothetical protein
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
31_018_scaffold_142_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17947..18486)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1584 Tax=Bacteria RepID=RL5_ECO24
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
Displaying items 1-30 of 47 in total

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