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31_018_scaffold_39

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Displaying items 1-30 of 97 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
31_018_scaffold_39_1
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(686..2032)
DNA (1347bp) protein (449aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate (Si)-synthase n=4 Tax=Bacteria RepID=C8WJ77_EGGLE
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_39_2
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2375..3982
DNA (1608bp) protein (536aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WJ76_EGGLE
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ACV54078.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_39_3
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3984..4928
DNA (945bp) protein (315aa)
ABC transporter family protein n=1 Tax=Clostridium difficile F501 RepID=T4C1F1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI74834.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
ABC transporter-like protein
31_018_scaffold_39_4
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5321..6334)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=2 Tax=Eggerthella RepID=E5X8Y8_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90660.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
31_018_scaffold_39_5
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6756..7445
DNA (690bp) protein (230aa)
TetR family Bacterial regulatory protein n=2 Tax=Eggerthella RepID=E5X8Y5_9ACTN
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGC88459.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
TetR family transcriptional regulator
31_018_scaffold_39_6
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7488..8405
DNA (918bp) protein (306aa)
ABC transporter family protein n=1 Tax=Clostridium difficile F501 RepID=T4C1E3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI74837.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein
31_018_scaffold_39_7
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8398..9195
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=2 Tax=Eggerthella RepID=E5X8Y3_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EGC88449.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein; K01992 ABC-2 type transport system permease protein
31_018_scaffold_39_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9253..9681)
DNA (429bp) protein (143aa)
Chagasin peptidase inhibitor I42 family protein n=1 Tax=Clostridium difficile F501 RepID=T4C1M6_CLODI
Chagasin peptidase inhibitor I42 family protein {ECO:0000313|EMBL:EQI14024.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein; K14475 inhibitor of cysteine peptidase
31_018_scaffold_39_9
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9734..10381)
DNA (648bp) protein (216aa)
Putative lipoprotein n=2 Tax=Eggerthella RepID=F0HQJ4_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EGC88458.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
31_018_scaffold_39_trna_1
unknown

Not on your lists

11024..11097
DNA (74bp)
transferRNA Arg
31_018_scaffold_39_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11336..12715
DNA (1380bp) protein (460aa)
MgtE intracellular N domain-containing protein n=2 Tax=Eggerthella RepID=E5X8Y0_9ACTN
MgtE integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KGI74841.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
31_018_scaffold_39_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12720..14033
DNA (1314bp) protein (438aa)
Natural resistance-associated macrophage family protein n=1 Tax=Clostridium difficile F501 RepID=T4BVH0_CLODI
Natural resistance-associated macrophage family protein {ECO:0000313|EMBL:EQI14032.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
natural resistance-associated macrophage protein
31_018_scaffold_39_12
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14086..14562)
DNA (477bp) protein (159aa)
Transcriptional regulator, BadM/Rrf2 family n=3 Tax=Bacteria RepID=C8WJ66_EGGLE
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EGC88460.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
31_018_scaffold_39_13
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14795..15688
DNA (894bp) protein (298aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WJ65_EGGLE
5-formyltetrahydrofolate cyclo-ligase
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ACV54067.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_39_14
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15948..17216
DNA (1269bp) protein (423aa)
ISAtfe-like protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZP60_ACICS
Transposase {ECO:0000313|EMBL:KFI91761.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
ISAtfe-like protein
31_018_scaffold_39_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17413..18846
DNA (1434bp) protein (478aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile F501 RepID=T4BYI1_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI14031.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
LuxR family transcriptional regulator
31_018_scaffold_39_16
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19097..20635)
DNA (1539bp) protein (513aa)
FAD binding domain protein n=3 Tax=Bacteria RepID=F0HQK2_9ACTN
FAD binding domain protein {ECO:0000313|EMBL:EGC88456.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
31_018_scaffold_39_17
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21091..22749)
DNA (1659bp) protein (553aa)
Na+/H+ antiporter NhaC n=4 Tax=Bacteria RepID=C8WJ62_EGGLE
Na+/H+ antiporter NhaC
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EGC88559.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
31_018_scaffold_39_18
unknown

Not on your lists

22750..23238
DNA (489bp) protein (163aa)

This feature has no annotations

31_018_scaffold_39_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23115..24116)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4AW36_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI01912.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
31_018_scaffold_39_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24916..26454)
DNA (1539bp) protein (513aa)
Sodium symporter family protein n=1 Tax=Clostridium difficile F501 RepID=T4AW32_CLODI
Sodium symporter family protein {ECO:0000313|EMBL:EQI01907.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Na+/solute symporter; K11928 sodium/proline symporter
31_018_scaffold_39_21
unknown

Not on your lists

comp(26711..26998)
DNA (288bp) protein (96aa)

This feature has no annotations

31_018_scaffold_39_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27220..28461)
DNA (1242bp) protein (414aa)
phenylacetate--CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-coenzyme A ligase n=1 Tax=Clostridium difficile F501 RepID=T4B2A0_CLODI
Phenylacetate-coenzyme A ligase {ECO:0000313|EMBL:EQI01904.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
31_018_scaffold_39_23
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28818..29804)
DNA (987bp) protein (329aa)
Diguanylate cyclase n=2 Tax=Eggerthella RepID=C8WJ51_EGGLE
diguanylate cyclase
Uncharacterized protein {ECO:0000313|EMBL:KGI74582.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
31_018_scaffold_39_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29964..30560)
DNA (597bp) protein (199aa)
pyruvate ferredoxin/flavodoxin oxidoreductase; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein n=1 Tax=Clostridium difficile F501 RepID=T4AYS4_CLODI
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein {ECO:0000313|EMBL:EQI01906.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
31_018_scaffold_39_25
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30553..32868)
DNA (2316bp) protein (772aa)
thiamine pyrophosphate TPP-binding domain-containing protein; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
Indolepyruvate ferredoxin oxidoreductase n=2 Tax=Eggerthella RepID=E5X8W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74584.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
31_018_scaffold_39_26
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32972..34789)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WJ48_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV54050.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_39_27
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34734..35336)
DNA (603bp) protein (201aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WJ47_EGGLE
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV54049.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_39_28
unknown

Not on your lists

35751..35942
DNA (192bp) protein (64aa)

This feature has no annotations

31_018_scaffold_39_29
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35900..36370)
DNA (471bp) protein (157aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=4 Tax=Bacteria RepID=C8WJ46_EGGLE
Displaying items 1-30 of 97 in total

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