ggKbase home page

31_018_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 58 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
31_018_scaffold_83_1
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(75..1010)
DNA (936bp) protein (312aa)
undecaprenyl-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Undecaprenyl-diphosphatase n=4 Tax=Bacteria RepID=C8WP28_EGGLE
31_018_scaffold_83_2
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1041..1370)
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WP27_EGGLE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC88691.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
31_018_scaffold_83_3
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1443..2336)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=2 Tax=Eggerthella RepID=E5X6Z5_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC88817.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
endonuclease; K15051 DNA-entry nuclease
31_018_scaffold_83_4
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2453..3304
DNA (852bp) protein (284aa)
GRD2I Delphilin n=2 Tax=Eggerthella RepID=E5X6Z6_9ACTN
TIGR02452 family protein {ECO:0000313|EMBL:EGC88851.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
31_018_scaffold_83_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3572..5179
DNA (1608bp) protein (536aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium difficile F501 RepID=T4BFQ6_CLODI
31_018_scaffold_83_6
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5851..6714
DNA (864bp) protein (288aa)
RNA helicase n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6C147_9ACTN
RNA helicase
RNA helicase {ECO:0000313|EMBL:BAN77633.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
31_018_scaffold_83_7
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6684..7787
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KWP1_9ACTN
RNA helicase
Uncharacterized protein {ECO:0000313|EMBL:EOS50780.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
31_018_scaffold_83_8
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7751..9190)
DNA (1440bp) protein (480aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N2K0_SLAHD
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:ACV23508.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
31_018_scaffold_83_9
Slackia exigua, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9533..11197
DNA (1665bp) protein (555aa)
Tat pathway signal sequence domain protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF69_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEZ61753.1}; TaxID=649764 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia exigua ATCC 700122.;"
succinate dehydrogenase/fumarate reductase flavoprotein subunit
31_018_scaffold_83_10
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11380..12018)
DNA (639bp) protein (213aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EAA8_9ACTN
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL04655.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
31_018_scaffold_83_11
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12075..12248
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BNC6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD67032.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
hypothetical protein
31_018_scaffold_83_12
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12466..13071
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WMX3_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV54754.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_83_13
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13068..13958
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBZ3_9ACTN
Domain of unknown function (DUF1814).
Uncharacterized protein {ECO:0000313|EMBL:CBL05240.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
31_018_scaffold_83_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14094..15233)
DNA (1140bp) protein (380aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Histidine kinase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WMX2_EGGLE
histidine kinase
31_018_scaffold_83_15
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15230..15904)
DNA (675bp) protein (225aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Coriobacteriaceae RepID=D6EBZ5_9ACTN
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACV54752.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_83_16
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16167..17036
DNA (870bp) protein (290aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WMW9_EGGLE
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACV54750.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_83_17
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17066..18037
DNA (972bp) protein (324aa)
Redoxin domain protein n=2 Tax=Coriobacteriaceae RepID=C8WMW8_EGGLE
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACV54749.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
31_018_scaffold_83_18
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18186..18374)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Coriobacteriaceae RepID=C8WMW7_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL05244.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
31_018_scaffold_83_19
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18882..19076
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Coriobacteriaceae RepID=C8WMW6_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL05245.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
31_018_scaffold_83_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19317..19835
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BEC8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI07815.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
31_018_scaffold_83_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19824..21122)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BED2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI07820.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
31_018_scaffold_83_22
unknown

Not on your lists

comp(21149..21403)
DNA (255bp) protein (85aa)

This feature has no annotations

31_018_scaffold_83_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22102..22272
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BJ04_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI07819.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
31_018_scaffold_83_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22311..24125
DNA (1815bp) protein (605aa)
N-6 DNA Methylase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BJ01_CLODI
N-6 DNA Methylase family protein {ECO:0000313|EMBL:EQI07814.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
N-6 DNA methylase
31_018_scaffold_83_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24128..25366
DNA (1239bp) protein (413aa)
type I restriction modification DNA specificity protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Type I restriction modification DNA specificity domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BFQ1_CLODI
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EQI07816.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
31_018_scaffold_83_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25369..25734
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BJ09_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI07824.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
31_018_scaffold_83_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25738..28842
DNA (3105bp) protein (1035aa)
putative restriction enzyme; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
DEAD/DEAH box helicase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BCN4_CLODI
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:EQI07822.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
31_018_scaffold_83_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28993..31578
DNA (2586bp) protein (862aa)
Viral (Super1) RNA helicase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BCM9_CLODI
Viral (Super1) RNA helicase family protein {ECO:0000313|EMBL:EQI07817.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
31_018_scaffold_83_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31840..32214
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BIM5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI07823.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
31_018_scaffold_83_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32290..33030)
DNA (741bp) protein (247aa)
IstB-like ATP binding family protein n=1 Tax=Clostridium difficile F501 RepID=T4B0C7_CLODI
IstB-like ATP binding family protein {ECO:0000313|EMBL:EQI02336.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
IstB domain protein ATP-binding protein
Displaying items 1-30 of 58 in total

View Taxonomy