ggKbase home page

31_018_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 55 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
31_018_scaffold_82_trna_1
unknown

Not on your lists

1326..1398
DNA (73bp)
transferRNA Trp
31_018_scaffold_82_trna_2
unknown

Not on your lists

1515..1588
DNA (74bp)
transferRNA Arg
31_018_scaffold_82_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1749..2192)
DNA (444bp) protein (148aa)
UPI0003D5BF21 related cluster n=1 Tax=unknown RepID=UPI0003D5BF21
Uncharacterized protein {ECO:0000313|EMBL:ETI86774.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
31_018_scaffold_82_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2205..2480)
DNA (276bp) protein (92aa)
UPI0003D68B45 related cluster n=1 Tax=unknown RepID=UPI0003D68B45
Uncharacterized protein {ECO:0000313|EMBL:ETI86773.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
helix-turn-helix domain-containing protein
31_018_scaffold_82_trna_3
unknown

Not on your lists

3351..3432
DNA (82bp)
transferRNA Leu
31_018_scaffold_82_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3540..6836
DNA (3297bp) protein (1099aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNY7_9FIRM
31_018_scaffold_82_4
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6833..8440
DNA (1608bp) protein (536aa)
UPI0003D5F1C7 related cluster n=1 Tax=unknown RepID=UPI0003D5F1C7
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ETJ20133.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
polysaccharide biosynthesis protein; K06409 stage V sporulation protein B
31_018_scaffold_82_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8424..9206
DNA (783bp) protein (261aa)
MazG family protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNY9_9FIRM
MazG family protein {ECO:0000313|EMBL:EEP65809.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
MazG family protein; K02499 tetrapyrrole methylase family protein / MazG family protein
31_018_scaffold_82_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9258..9557
DNA (300bp) protein (100aa)
DNA-binding protein HU n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNZ0_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:EEP65810.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
31_018_scaffold_82_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9640..10803
DNA (1164bp) protein (388aa)
monogalactosyldiacylglycerol synthase; K03429 1,2-diacylglycerol 3-glucosyltransferase [EC:2.4.1.157]
Monogalactosyldiacylglycerol synthase, C-terminal domain protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNZ1_9FIRM
Monogalactosyldiacylglycerol synthase, C-terminal domain protein {ECO:0000313|EMBL:EEP65811.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
31_018_scaffold_82_8
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10933..11253)
DNA (321bp) protein (107aa)
UPI0003D69065 related cluster n=1 Tax=unknown RepID=UPI0003D69065
Uncharacterized protein {ECO:0000313|EMBL:ETJ18199.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
hypothetical protein
31_018_scaffold_82_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11366..13372
DNA (2007bp) protein (669aa)
ABC transporter, ATP-binding protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNZ4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP65814.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
31_018_scaffold_82_10
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13505..14974
DNA (1470bp) protein (490aa)
Hydrogenase, Fe-only n=1 Tax=Veillonella atypica KON RepID=L1PNM8_9FIRM
[FeFe] hydrogenase, group A {ECO:0000313|EMBL:EPD79659.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
hydrogenase, Fe-only
31_018_scaffold_82_11
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15381..16010
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR60889.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein; K07220 hypothetical protein
31_018_scaffold_82_12
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16003..17001
DNA (999bp) protein (333aa)
Phosphate transporter family protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC95_9FIRM
Phosphate transporter family protein {ECO:0000313|EMBL:EFR60817.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
31_018_scaffold_82_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17417..17590
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB85544.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
31_018_scaffold_82_14
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17825..18829)
DNA (1005bp) protein (335aa)
UPI0003D5FD48 related cluster n=1 Tax=unknown RepID=UPI0003D5FD48
Periplasmic binding protein {ECO:0000313|EMBL:ETJ18092.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
31_018_scaffold_82_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18849..19595)
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP00_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP65820.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
ABC transporter
31_018_scaffold_82_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19622..20629)
DNA (1008bp) protein (336aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FP01_9FIRM
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EEP65821.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
transporter permease; K02015 iron complex transport system permease protein
31_018_scaffold_82_17
unknown

Not on your lists

20842..20973
DNA (132bp) protein (44aa)

This feature has no annotations

31_018_scaffold_82_18
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20997..21452
DNA (456bp) protein (152aa)
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC93_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFR60891.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
31_018_scaffold_82_19
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21474..21749
DNA (276bp) protein (92aa)
PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component [EC:2.7.1.69]
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC92_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFR60725.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
31_018_scaffold_82_20
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21781..23148
DNA (1368bp) protein (456aa)
Putative sugar-specific permease, SgaT/UlaA n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC91_9FIRM
Putative sugar-specific permease, SgaT/UlaA {ECO:0000313|EMBL:EFR60797.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
sugar-specific permease SgaT/UlaA; K03475 PTS system, ascorbate-specific IIC component
31_018_scaffold_82_21
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23148..23543
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR60694.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein; K09790 hypothetical protein
31_018_scaffold_82_22
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23781..24638
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC89_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFR60982.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
AraC family transcriptional regulator
31_018_scaffold_82_23
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24885..29909
DNA (5025bp) protein (1675aa)
TonB-dependent receptor plug domain protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC88_9FIRM
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EFR60976.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
TonB-dependent receptor plug
31_018_scaffold_82_24
unknown

Not on your lists

comp(29844..30014)
DNA (171bp) protein (57aa)

This feature has no annotations

31_018_scaffold_82_25
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30097..35184
DNA (5088bp) protein (1696aa)
TonB-dependent receptor plug domain protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP07_9FIRM
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EEP65827.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
TonB-dependent receptor plug
31_018_scaffold_82_26
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

35220..35837
DNA (618bp) protein (206aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LC86_9FIRM
Transporter, MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:EFR60807.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB
31_018_scaffold_82_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

35834..36247
DNA (414bp) protein (138aa)
Transport energizing protein, ExbD/TolR family n=3 Tax=Veillonella dispar ATCC 17748 RepID=C4FP09_9FIRM
Transport energizing protein, ExbD/TolR family {ECO:0000313|EMBL:EEP65829.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
biopolymertransporter ExbD/TolR; K03559 biopolymer transport protein ExbD
Displaying items 1-30 of 55 in total

View Taxonomy