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400_zone1_2014_Ig3401_scaffold_1342

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
400_zone1_2014_Ig3401_scaffold_1342_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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2..598
DNA (597bp) protein (199aa)
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein id=5040553 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
outer membrane adhesin like proteiin
400_zone1_2014_Ig3401_scaffold_1342_2
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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854..1240
DNA (387bp) protein (129aa)
DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=CG_Aenigma_01
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=RPOH_PYRAB
400_zone1_2014_Ig3401_scaffold_1342_3
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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1468..2139
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTJ2_PERMH
hypothetical protein Tax=CG_Dehalo_02
hypothetical protein
400_zone1_2014_Ig3401_scaffold_1342_4
CG_Elusi_05, Elusimicrobia, Bacteria

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2136..3011
DNA (876bp) protein (292aa)
DNA methylase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTJ1_PERMH rbh
DNA methylase Tax=CG_Elusi_05
DNA methylase
400_zone1_2014_Ig3401_scaffold_1342_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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3123..6413
DNA (3291bp) protein (1097aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=RBG_16_Micrarchaeota_36_9_curated
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O59226_PYRHO
400_zone1_2014_Ig3401_scaffold_1342_6
unknown

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6459..6557
DNA (99bp) protein (33aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1342_7
CG_Woesearch_02, Woesearchaeota, Archaea

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6541..7533
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0RZR1_FINM2
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
400_zone1_2014_Ig3401_scaffold_1342_8
unknown

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7652..7900
DNA (249bp) protein (83aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1342_9
unknown

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8153..8500
DNA (348bp) protein (116aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1342_10
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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8634..11123
DNA (2490bp) protein (830aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanother
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV
400_zone1_2014_Ig3401_scaffold_1342_11
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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11280..12482
DNA (1203bp) protein (401aa)
DNA-directed RNA polymerase, subunit A''; K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Tax=RBG_16_Micrarchaeota_36_9_curated
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VXR0_9EURY
DNA-directed RNA polymerase, subunit A''
400_zone1_2014_Ig3401_scaffold_1342_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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12771..13115
DNA (345bp) protein (115aa)
50S ribosomal protein L30e n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BN36_HYPBU
50S ribosomal protein L30e; K02908 large subunit ribosomal protein L30e Tax=RBG_16_Micrarchaeota_36_9_curated
50S ribosomal protein L30e
400_zone1_2014_Ig3401_scaffold_1342_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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13257..13664
DNA (408bp) protein (136aa)
Transcription termination-antitermination factor NusA, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28388_ARCFU
nusA; transcription termination factor NusA; K02600 N utilization substance protein A Tax=RBG_16_Micrarchaeota_36_9_curated
NusA family KH domain
400_zone1_2014_Ig3401_scaffold_1342_14
unknown

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13754..13915
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 14 items

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