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400_zone1_2014_Ig3401_scaffold_1475

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
400_zone1_2014_Ig3401_scaffold_1475_1
unknown

Not on your lists

comp(2..112)
DNA (111bp) protein (37aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1475_2
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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234..425
DNA (192bp) protein (64aa)
30S ribosomal protein S17e n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PX41_METTM
rps17e; 30S ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Meth
400_zone1_2014_Ig3401_scaffold_1475_3
unknown

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457..966
DNA (510bp) protein (170aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1475_4
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(982..2775)
DNA (1794bp) protein (598aa)
Transglutaminase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBF1_9BACT
transglutaminase domain-containing protein Tax=CG_Pacearch_04
transglutaminase domain-containing protein
400_zone1_2014_Ig3401_scaffold_1475_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

2837..3532
DNA (696bp) protein (232aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=CG_Aenigma_01
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=5093230 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta
400_zone1_2014_Ig3401_scaffold_1475_6
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

3547..4494
DNA (948bp) protein (316aa)
Replication factor C small subunit n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9H4_METFA
rfc; replication factor C small subunit
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=57
400_zone1_2014_Ig3401_scaffold_1475_7
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

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comp(4509..5369)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-P17 RepID=UPI00037CE129
permease Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
putative permease
400_zone1_2014_Ig3401_scaffold_1475_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

5439..6572
DNA (1134bp) protein (378aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=CG_Aenigma_01
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
replication factor C large subunit
400_zone1_2014_Ig3401_scaffold_1475_9
unknown

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comp(6562..6984)
DNA (423bp) protein (141aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1475_10
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(6995..7306)
DNA (312bp) protein (104aa)
Translation initiation factor 1A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXR6_METFV
translation initiation factor 1a (aeif-1a)
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
400_zone1_2014_Ig3401_scaffold_1475_11
unknown

Not on your lists

comp(7387..8049)
DNA (663bp) protein (221aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1475_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(8292..9536)
DNA (1245bp) protein (415aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
400_zone1_2014_Ig3401_scaffold_1475_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(9585..10067)
DNA (483bp) protein (161aa)
von Willebrand factor, type A Tax=RBG_16_Micrarchaeota_36_9_curated
400_zone1_2014_Ig3401_scaffold_1475_14
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(10070..10360)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TA54_ACIB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB05357.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
400_zone1_2014_Ig3401_scaffold_1475_15
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(10403..10825)
DNA (423bp) protein (141aa)
Translation initiation factor 2 subunit beta n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGI5_ARCPA
translation initiation factor aIF-2 subunit beta; K03238 translation initiation factor 2 subunit 2 Tax=AR6
translation initiation factor aIF-2 subunit beta
400_zone1_2014_Ig3401_scaffold_1475_16
RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(10832..11320)
DNA (489bp) protein (163aa)
dCMP deaminase (EC:3.5.-.-)
Tax=RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated
400_zone1_2014_Ig3401_scaffold_1475_17

Not on your lists

comp(11398..12138)
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO47729.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Uncharacterized protein conserved in archaea id=5040619 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Displaying 17 items

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