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400_zone1_2014_Ig3401_scaffold_1903

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
400_zone1_2014_Ig3401_scaffold_1903_1
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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comp(3..659)
DNA (657bp) protein (219aa)
modification methylase n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035CA377
DNA methylase Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
DNA methylase
400_zone1_2014_Ig3401_scaffold_1903_2
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(682..1656)
DNA (975bp) protein (325aa)
gsp-4; putative type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=RBG_16_Micrarchaeota_36_9_curated
gsp-4; putative type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=18248742 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
type II secretion system protein F
400_zone1_2014_Ig3401_scaffold_1903_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1848..2660)
DNA (813bp) protein (271aa)
hypothetical protein; K07333 archaeal flagellar protein FlaJ Tax=RBG_16_Micrarchaeota_36_9_curated
Putative uncharacterized protein id=3733861 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
400_zone1_2014_Ig3401_scaffold_1903_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(2757..4514)
DNA (1758bp) protein (586aa)
hypothetical protein; K07332 archaeal flagellar protein FlaI Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein; K07332 archaeal flagellar protein FlaI id=18248745 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
hypothetical protein
400_zone1_2014_Ig3401_scaffold_1903_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(4541..4960)
DNA (420bp) protein (140aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
400_zone1_2014_Ig3401_scaffold_1903_6
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(5283..5927)
DNA (645bp) protein (215aa)
Hef nuclease n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6V2J1_9EURY
Hef nuclease
Hef nuclease {ECO:0000313|EMBL:ENN96478.1}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villos
400_zone1_2014_Ig3401_scaffold_1903_7
unknown

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6337..6738
DNA (402bp) protein (134aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1903_8

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comp(6759..8270)
DNA (1512bp) protein (504aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZK2_METFV
Fanconi anemia group M protein {ECO:0000313|EMBL:KHO50017.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
dead/deah box helicase domain-containing protein
400_zone1_2014_Ig3401_scaffold_1903_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8384..9265)
DNA (882bp) protein (294aa)
type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=5042173 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=AR5
Flp pilus assembly protein TadC
400_zone1_2014_Ig3401_scaffold_1903_10
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(9459..10418)
DNA (960bp) protein (320aa)
Type II secretion system F domain protein; K07333 archaeal flagellar protein FlaJ Tax=RBG_16_Micrarchaeota_36_9_curated
type II secretion system protein; K07333 archaeal flagellar protein FlaJ id=18248123 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
type II secretion system protein
400_zone1_2014_Ig3401_scaffold_1903_11
unknown

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comp(10719..11081)
DNA (363bp) protein (121aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_1903_12
unknown

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comp(11086..11181)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 12 items

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