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400_zone1_2014_Ig3401_scaffold_3186

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
400_zone1_2014_Ig3401_scaffold_3186_1
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

2..208
DNA (207bp) protein (69aa)
scpB; chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=RBG_16_Micrarchaeota_36_9_curated
400_zone1_2014_Ig3401_scaffold_3186_2
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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189..2168
DNA (1980bp) protein (660aa)
Predicted fibronectin-binding protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YSV0_THEON
fibronectin-binding protein
Predicted fibronectin-binding protein {ECO:0000313|EMBL:ACJ15637.1}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus on
400_zone1_2014_Ig3401_scaffold_3186_3
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(2172..2873)
DNA (702bp) protein (234aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
Phosphoserine phosphatase (SerB) n=1 Tax=Idiomarina baltica OS145 RepID=A3WIX6_9GAMM
phosphoserine phosphatase
400_zone1_2014_Ig3401_scaffold_3186_4
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2912..3070)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Psychromonas hadalis RepID=UPI0003B7807C
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
hypothetical protein
400_zone1_2014_Ig3401_scaffold_3186_5
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

3471..4028
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UB02_FERPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFG34695.1}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans (strain
400_zone1_2014_Ig3401_scaffold_3186_6
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4133..4561
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00030B5CF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV47618.1}; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola
400_zone1_2014_Ig3401_scaffold_3186_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(4826..5293)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036450B6
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=RBG_16_Micrarchaeota_36_9_curated
ribosomal protein L31E
400_zone1_2014_Ig3401_scaffold_3186_8
unknown

Not on your lists

5402..5785
DNA (384bp) protein (128aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3186_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(5813..6838)
DNA (1026bp) protein (342aa)
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_16_Micrarchaeota_36_9_curated
transcription initiation factor IIB (TFIIB); K03124 transcription initiation factor TFIIB id=18248093 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
Transcription initiation factor IIB
400_zone1_2014_Ig3401_scaffold_3186_10
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(7356..7526)
DNA (171bp) protein (57aa)
50S ribosomal protein L24e n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNH4_9EURY
RPL24A; 50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e Tax=RBG_16_Micrarchaeota_36_9_curated
LSU ribosomal protein L24E
400_zone1_2014_Ig3401_scaffold_3186_11
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7609..7956)
DNA (348bp) protein (116aa)
seg Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
seg 5..18 id=96147 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
400_zone1_2014_Ig3401_scaffold_3186_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


comp(8008..8229)
DNA (222bp) protein (74aa)
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=RBG_16_Micrarchaeota_36_9_curated
ribosomal protein S28E/S33 id=18248032 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribosomal protein S28e
400_zone1_2014_Ig3401_scaffold_3186_13
unknown

Not on your lists

comp(8329..8493)
DNA (165bp) protein (55aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3186_14
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


comp(8538..8891)
DNA (354bp) protein (118aa)
50S ribosomal protein L7Ae n=10 Tax=Sulfolobus islandicus RepID=RL7A_SULIA
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=RBG_16_Micrarchaeota_36_9_curated
rpl7ae; 50S ribosomal protein L7Ae
400_zone1_2014_Ig3401_scaffold_3186_15
unknown

Not on your lists

comp(8994..9524)
DNA (531bp) protein (177aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3186_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9553..11208)
DNA (1656bp) protein (552aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=AR11
gltX; glutamyl-tRNA ligase (EC:6.1.1.17) id=18248946 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
glutamyl-tRNA synthetase (EC:6.1.1.18)
400_zone1_2014_Ig3401_scaffold_3186_17
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(11663..11845)
DNA (183bp) protein (61aa)
50S ribosomal protein L37e n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RL37_METJA
50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methan
400_zone1_2014_Ig3401_scaffold_3186_18
unknown

Not on your lists

comp(11851..12126)
DNA (276bp) protein (92aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3186_19
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(12320..12541)
DNA (222bp) protein (74aa)
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=RBG_16_Micrarchaeota_36_9_curated
Small nuclear ribonucleoprotein, LSM family; K04796 small nuclear ribonucleoprotein id=5044331 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Sm ribonucleoprotein-like protein
Displaying 19 items

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