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400_zone1_2014_Ig3401_scaffold_3778

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
400_zone1_2014_Ig3401_scaffold_3778_1
unknown

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74..178
DNA (105bp) protein (35aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3778_2
unknown

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202..330
DNA (129bp) protein (43aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3778_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(334..2028)
DNA (1695bp) protein (565aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
Probable thermostable DNA ligase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=DNLI_PYRHO
ATP-dependent DNA ligase Tax=CG_Aenigma_01
400_zone1_2014_Ig3401_scaffold_3778_4
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2177..2893
DNA (717bp) protein (239aa)
Nitroreductase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TY45_9EURY
nitroreductase
Nitroreductase {ECO:0000313|EMBL:CEA13302.1}; Nitroreductase family protein {ECO:0000313|EMBL:AIS31175.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacte
400_zone1_2014_Ig3401_scaffold_3778_5
unknown

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comp(3125..3517)
DNA (393bp) protein (131aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3778_6
unknown

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comp(3523..3744)
DNA (222bp) protein (74aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3778_7
Pyrobaculum aerophilum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(3745..4917)
DNA (1173bp) protein (391aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
Ketol-acid reductoisomerase n=1 Tax=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) RepID=ILVC_PYRAE
400_zone1_2014_Ig3401_scaffold_3778_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(5184..6338)
DNA (1155bp) protein (385aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Micrarchaeota_49_10_curated
Cell division protein FtsZ 2 id=4759206 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria) rbh
cell division protein FtsZ
400_zone1_2014_Ig3401_scaffold_3778_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(6819..7400)
DNA (582bp) protein (194aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
400_zone1_2014_Ig3401_scaffold_3778_10
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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8225..8545
DNA (321bp) protein (107aa)
ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Micrarchaeota_36_9_curated
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps10p; 30S ribosomal protein S10
400_zone1_2014_Ig3401_scaffold_3778_11
unknown

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8616..8999
DNA (384bp) protein (128aa)

This feature has no annotations

400_zone1_2014_Ig3401_scaffold_3778_12

Not on your lists

9148..9393
DNA (246bp) protein (82aa)
Marine sediment metagenome DNA, contig: S01H4_C00331 {ECO:0000313|EMBL:GAG70669.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 12 items

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