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64_002_scaffold_89

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Displaying items 1-30 of 195 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_89_1
Enterobacter sp. 35027, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..868)
DNA (867bp) protein (289aa)
PTS system protein n=3 Tax=Citrobacter freundii RepID=K8QWU5_CITFR
PTS glucose-specific subunit IIBC
PTS glucose-specific subunit IIBC {ECO:0000313|EMBL:KJO07600.1}; TaxID=1619239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35027.;"
64_002_scaffold_89_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1162..1959)
DNA (798bp) protein (266aa)
Metallodependent hydrolase n=5 Tax=Citrobacter RepID=J0M3K6_9ENTR
DNAse {ECO:0000313|EMBL:KJC11428.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNAse
64_002_scaffold_89_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1970..2974)
DNA (1005bp) protein (335aa)
DNA polymerase III delta prime subunit {ECO:0000313|EMBL:CDL41935.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDL41935.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta n=1 Tax=Citrobacter sp. KTE30 RepID=R8UVN2_9ENTR
64_002_scaffold_89_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2971..3612)
DNA (642bp) protein (214aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Thymidylate kinase n=5 Tax=Citrobacter RepID=J0MA96_9ENTR
thymidylate kinase
64_002_scaffold_89_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3602..4624)
DNA (1023bp) protein (341aa)
Protein YceG n=5 Tax=Citrobacter RepID=J0VW75_9ENTR
YceG-like family protein {ECO:0000313|EMBL:KEL82500.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
aminodeoxychorismate lyase
64_002_scaffold_89_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4627..5436)
DNA (810bp) protein (270aa)
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KEL82501.1}; EC=4.1.3.38 {ECO:0000313|EMBL:KEL82501.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
4-amino-4-deoxychorismate lyase (EC:4.1.3.38)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DID5_CITFR
64_002_scaffold_89_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5572..6603)
DNA (1032bp) protein (344aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=9 Tax=Citrobacter RepID=C1M364_9ENTR
64_002_scaffold_89_8
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6898..7134)
DNA (237bp) protein (79aa)
Acyl carrier protein n=2202 Tax=cellular organisms RepID=ACP1_SHIFL
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=913083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Uganda str. R8-3404.;"
64_002_scaffold_89_9
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7273..7581)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) RepID=A9MGC7_SALAR
fabG; 3-oxoacyl-[acyl-carrier protein] reductase
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EPI73749.1}; TaxID=1192585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Enteritidis str. 08-1080.;"
64_002_scaffold_89_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7559..7978)
DNA (420bp) protein (140aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDL41928.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDL41928.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
3-oxoacyl-[acyl-carrier-protein] reductase n=6 Tax=Citrobacter RepID=C1M362_9ENTR
3-oxoacyl-(acyl-carrier-protein) reductase
64_002_scaffold_89_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7991..8920)
DNA (930bp) protein (310aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Citrobacter RepID=J0VW70_9ENTR
malonyl CoA-ACP transacylase
64_002_scaffold_89_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8936..9889)
DNA (954bp) protein (318aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
3-oxoacyl-ACP synthase (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=4 Tax=Citrobacter RepID=C1M360_9ENTR
64_002_scaffold_89_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9967..11016)
DNA (1050bp) protein (350aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate acyltransferase; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Phosphate acyltransferase n=4 Tax=Citrobacter RepID=M3CBK6_CITFR
phosphate acyltransferase
64_002_scaffold_89_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11169..11342)
DNA (174bp) protein (58aa)
50S ribosomal protein L32 n=12 Tax=Enterobacteriaceae RepID=C1M358_9ENTR
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
64_002_scaffold_89_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11359..11880)
DNA (522bp) protein (174aa)
Uncharacterized protein n=10 Tax=Enterobacteriaceae RepID=I6H029_SHIFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDF19128.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
64_002_scaffold_89_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12078..12662
DNA (585bp) protein (195aa)
Maf-like protein D186_04280 n=2 Tax=Citrobacter freundii RepID=K8R5G2_CITFR
Maf-like protein P834_06169 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
septum formation inhibitor Maf
64_002_scaffold_89_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12620..12745)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V0P9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70454.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_002_scaffold_89_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12745..13740)
DNA (996bp) protein (332aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Pseudouridine synthase n=7 Tax=Citrobacter RepID=C1M355_9ENTR
23S rRNA pseudouridylate synthase
64_002_scaffold_89_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14398..17661
DNA (3264bp) protein (1088aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Ribonuclease E n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1L0_CITFR
rne; ribonuclease E
64_002_scaffold_89_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17702..18727)
DNA (1026bp) protein (342aa)
LysR family transcriptional regulator n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QVA5_CITFR
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC11444.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LysR family transcriptional regulator
64_002_scaffold_89_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18749..19948
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UWH1_9ENTR
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KEL82514.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
MFS transporter
64_002_scaffold_89_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20026..20979)
DNA (954bp) protein (318aa)
Flagellar hook-associated protein FlgL n=2 Tax=Citrobacter RepID=K8R5G7_CITFR
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:KEL82515.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
flgL; flagellar hook protein FlgL
64_002_scaffold_89_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20994..22652)
DNA (1659bp) protein (553aa)
Flagellar hook-associated protein 1 n=1 Tax=Citrobacter sp. KTE30 RepID=R8UXA2_9ENTR
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:KEL82516.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
flgK; flagellar hook protein FlgK
64_002_scaffold_89_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22717..23667)
DNA (951bp) protein (317aa)
Flagellar protein FlgJ [peptidoglycan hydrolase] {ECO:0000313|EMBL:CDL38973.1}; EC=3.2.1.- {ECO:0000313|EMBL:CDL38973.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Flagellar rod assembly protein/muramidase FlgJ n=3 Tax=Citrobacter RepID=K8R1L6_CITFR
flgJ; flagellar rod assembly protein FlgJ
64_002_scaffold_89_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23667..24764)
DNA (1098bp) protein (366aa)
Flagellar P-ring protein n=5 Tax=Citrobacter RepID=J0MA79_9ENTR
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flgI; flagellar basal body P-ring biosynthesis protein FlgA
64_002_scaffold_89_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24777..25475)
DNA (699bp) protein (233aa)
Flagellar L-ring protein n=4 Tax=Enterobacteriaceae RepID=I6H041_SHIFL
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flgH; flagellar basal body L-ring protein
64_002_scaffold_89_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25533..26315)
DNA (783bp) protein (261aa)
Flagellar basal-body rod protein flgG n=10 Tax=Citrobacter RepID=C1M346_9ENTR
Flagellar basal-body rod protein flgG {ECO:0000313|EMBL:ETX70444.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flgG; flagellar basal body rod protein FlgG
64_002_scaffold_89_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26329..27084)
DNA (756bp) protein (252aa)
Flagellar basal body rod protein FlgF n=6 Tax=Citrobacter RepID=J0M3H6_9ENTR
Flagellar basal-body rod protein flgF {ECO:0000313|EMBL:ETX70443.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flgF; flagellar basal body rod protein FlgF
64_002_scaffold_89_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27105..28316)
DNA (1212bp) protein (404aa)
Flagellar hook protein FlgE n=2 Tax=Citrobacter RepID=K8R1L8_CITFR
Flagellar hook protein FlgE {ECO:0000313|EMBL:KJC11453.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
flgE; flagellar hook protein FlgE
64_002_scaffold_89_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28343..29041)
DNA (699bp) protein (233aa)
Basal-body rod modification protein flgD n=2 Tax=Citrobacter RepID=G9SHX7_CITFR
Basal-body rod modification protein flgD {ECO:0000313|EMBL:ETX70441.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flgD; flagellar basal body rod modification protein
Displaying items 1-30 of 195 in total

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