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64_002_scaffold_151

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_151_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..533
DNA (531bp) protein (177aa)
Lipoprotein NlpI n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLD0_SHIFL
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lipoprotein NlpI
64_002_scaffold_151_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

713..2581
DNA (1869bp) protein (623aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ATP-dependent RNA helicase DeaD n=2 Tax=Citrobacter freundii RepID=K8QW47_CITFR
DEAD/DEAH box helicase
64_002_scaffold_151_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2719..3963
DNA (1245bp) protein (415aa)
Tryptophan permease n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQ08_CITFR
Tryptophan permease {ECO:0000313|EMBL:KKC63276.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
tryptophan permease
64_002_scaffold_151_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4051..5058)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DQC1_CITFR
Monooxygenase {ECO:0000313|EMBL:ETX67952.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_002_scaffold_151_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5235..6113)
DNA (879bp) protein (293aa)
Protease n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CI82_CITFR
Protease {ECO:0000313|EMBL:KJC04331.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_002_scaffold_151_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6122..7117)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QRJ5_CITFR
Protease {ECO:0000313|EMBL:KJC04330.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
protease
64_002_scaffold_151_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7338..7862
DNA (525bp) protein (175aa)
Sterol-binding protein n=6 Tax=Citrobacter RepID=J1G5K4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04329.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_002_scaffold_151_8
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7856..8359
DNA (504bp) protein (168aa)
Abc superfamily transport protein n=6 Tax=Citrobacter RepID=J0M8E2_9ENTR
Putative acetyltransferase YhbS {ECO:0000313|EMBL:GAL45849.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
acetyltransferase
64_002_scaffold_151_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8346..8645)
DNA (300bp) protein (100aa)
UPF0213 protein H262_08265 n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DQD4_CITFR
UPF0213 protein TO64_22040 {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
GIY-YIG nuclease superfamily protein
64_002_scaffold_151_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8698..9126
DNA (429bp) protein (143aa)
UPF0306 protein YhbP n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLC0_SHIFL
UPF0306 protein TO64_22035 {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_002_scaffold_151_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9164..9799
DNA (636bp) protein (212aa)
NAD dependent epimerase/dehydratase n=6 Tax=Citrobacter RepID=J0M1N6_9ENTR
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:KEL78124.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_002_scaffold_151_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9893..10468)
DNA (576bp) protein (192aa)
Phospholipid-binding domain protein n=8 Tax=Citrobacter RepID=J1G5J9_9ENTR
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETX67944.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_002_scaffold_151_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10478..11068)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=12 Tax=Enterobacteriaceae RepID=C1M9V4_9ENTR
DnaA initiator-associating protein DiaA
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
64_002_scaffold_151_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11103..11498)
DNA (396bp) protein (132aa)
UPF0102 protein WYG_0885 n=5 Tax=Citrobacter RepID=J0VUG1_9ENTR
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_002_scaffold_151_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11456..13507)
DNA (2052bp) protein (684aa)
Penicillin-binding protein activator LpoA n=1 Tax=Citrobacter sp. KTE30 RepID=R8URX3_9ENTR
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
penicillin-binding protein
64_002_scaffold_151_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13571..14434
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Ribosomal RNA small subunit methyltransferase I n=8 Tax=Citrobacter RepID=C1M9V1_9ENTR
16S rRNA methyltransferase
64_002_scaffold_151_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14437..15438
DNA (1002bp) protein (334aa)
HTH domain protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLB2_SHIFL
Cell division protein Fic {ECO:0000313|EMBL:KJC04319.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
filamentation induced by cAMP protein fic
64_002_scaffold_151_18
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15442..16161)
DNA (720bp) protein (240aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLB1_SHIFL
agaI; galactosamine-6-phosphate isomerase
64_002_scaffold_151_19
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16215..17006)
DNA (792bp) protein (264aa)
PTS system, mannose/fructose/sorbose , IID component family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLB0_SHIFL
PTS system, mannose/fructose/sorbose , IID component family protein {ECO:0000313|EMBL:EIQ69302.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID
64_002_scaffold_151_20
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16996..17802)
DNA (807bp) protein (269aa)
PTS system, mannose/fructose/sorbose , IIC component family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLA9_SHIFL
PTS system, mannose/fructose/sorbose , IIC component family protein {ECO:0000313|EMBL:EIQ69301.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
N-acetylgalactosamine-specific PTS system transporter subunit IIC
64_002_scaffold_151_21
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17853..18329)
DNA (477bp) protein (159aa)
Galactosamine-specific PTS system enzyme IIB component n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLA8_SHIFL
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:EIQ69300.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
agaB; N-acetylgalactosamine-specific enzyme IIB component of PTS
64_002_scaffold_151_22
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18516..19391)
DNA (876bp) protein (292aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1 Tax=Shigella flexneri 1235-66 RepID=I6GLA7_SHIFL
kbaY; tagatose-bisphosphate aldolase
64_002_scaffold_151_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19404..20558)
DNA (1155bp) protein (385aa)
Tagatose-6-phosphate ketose/aldose isomerase n=3 Tax=Citrobacter RepID=K8QQ19_CITFR
Aldose isomerase {ECO:0000313|EMBL:KJC09512.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
aldose isomerase
64_002_scaffold_151_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20860..21993)
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UMZ5_9ENTR
N-acetylglucosamine-6-phosphate deacetylase
64_002_scaffold_151_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21990..22424)
DNA (435bp) protein (145aa)
PTS system, N-acetylgalactosamine-and galactosamine-specific IIA component {ECO:0000313|EMBL:CDL38127.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL38127.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
PTS system fructose subfamily IIA component n=6 Tax=Citrobacter RepID=J1G5T9_9ENTR
hypothetical protein
64_002_scaffold_151_26
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22441..23319)
DNA (879bp) protein (293aa)
PTS system, mannose/fructose/sorbose family, IID component n=8 Tax=Citrobacter RepID=C1M9U6_9ENTR
PTS system N-acetylgalactosamine-specific transporter subunit IID
PTS system N-acetylgalactosamine-specific transporter subunit IID {ECO:0000313|EMBL:KKC63254.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
64_002_scaffold_151_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23309..24088)
DNA (780bp) protein (260aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1M9U5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF11419.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
PTS system N-acetylgalactosamine-specific transporter subunit IIC
64_002_scaffold_151_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24099..24572)
DNA (474bp) protein (158aa)
PTS system, mannose/fructose/sorbose family, IIB component n=8 Tax=Enterobacteriaceae RepID=C1M9U4_9ENTR
N-acetylgalactosamine-specific PTS system transporter subunit IIB {ECO:0000313|EMBL:ETX67933.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
PTS system N-acetylgalactosamine-specific transporter subunit IIB
64_002_scaffold_151_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24592..25887)
DNA (1296bp) protein (432aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=4 Tax=Citrobacter RepID=J0VUF0_9ENTR
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
tagatose-bisphosphate aldolase
64_002_scaffold_151_30
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26137..26943
DNA (807bp) protein (269aa)
DNA-binding transcriptional regulator AgaR n=7 Tax=Citrobacter RepID=J1G5T4_9ENTR
Putative aga operon transcriptional repressor {ECO:0000313|EMBL:GAL45827.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
transcriptional regulator
Displaying items 1-30 of 43 in total

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