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64_002_scaffold_50_4

Organism: 64_002_Citrobacter_freundii_52_827

near complete RP 46 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(1768..3189)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01579}; EC=2.1.1.178 {ECO:0000256|HAMAP-Rule:MF_01579};; 16S rRNA m5C1407 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01579}; rRNA (cytosine-C(5)-)-methyltransferase RsmF {ECO:0000256|HAMAP-Rule:MF_01579}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 473.0
  • Bit_score: 952
  • Evalue 1.50e-274
Ribosomal RNA small subunit methyltransferase F n=1 Tax=Citrobacter sp. KTE30 RepID=R8UQK6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 473.0
  • Bit_score: 953
  • Evalue 8.00e-275
yebU; RNA methyltransferase RsmF similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 462.0
  • Bit_score: 894
  • Evalue 9.50e-258

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
GTGGCTTATTTTCCCGACGCCTTTCTGACTAAAATGCGTGAAGCAATGCCTTCCACGCTCTCATTCGATGATTTTCTCGCTGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTCAATACGCTGAAAATCTCCGTTGCCGATTTCCTCACACTGACAGCACCTTACAACTGGTCTCTCACTCCGGTTCCCTGGTGTGCTGAAGGTTTCTGGATCGAACGCGATGAAGAAGAGTCAGTGCCGCTCGGTAGCACAGCAGAACATTTAAGCGGCCTGTTTTATATTCAGGAAGCCAGCTCAATGCTGCCAGTCGCTGCGCTGTTTGCCGAAGGCAATACCCCGGAACGCGTAATGGATGTCGCGGCAGCCCCTGGCTCCAAAACCACGCAAATTGCCGCAAAAATGAATAATCGAGGCGCCATTCTGGCGAATGAATTTTCTGCCAGTCGCGTCAAAGTTCTGCATGCCAATATCAGCCGTTGCGGGATAGCCAACGTCGCCCTGACCCATTTTGACGGACGAGTATTTGGCGCTGCGTTGCCGGAATCATTTGATGCCATATTGCTCGACGCCCCGTGTTCCGGGGAAGGCGTAGTGCGTAAAGACCCTGACGCGCTAAAAAACTGGTCGCCAGAAAGTAATCTGGAAATTGCCGCAACTCAGCGCGAACTGCTCGACAGCGCCTTTCACGCTCTGCGCCCCGGCGGCACGTTGGTTTACTCCACCTGTACACTTAACCGTGAAGAAAATGAAAACGTCATGCAGTGGTTGATTGAAACCTACCCGGACGCCGTCGAGTTTTTACCACTCGGCGATTTATTTCCACAGGCCGAACGCGCTCTGACGCCGGAAGGATTCCTGCATGTGTTTCCGCAAATTTACGATTGCGAAGGTTTCTTCGTTGCGCGTTTGCGCAAAACAGCCGCCATCCCTCCACTACCTGCGCCGACATATAAAGTCGGTAACTTCCCGTTTAGCCCGCTGAAAGGACGCGAGTCCGCGCTTGTCGCGCAAGCCGCGAGCGCTTGTGGACTGCAGTGGGAAGATAATTTACGCCTGTGGCAGCGCGATAAAGAGATTTGGCTGTTCCCAACAGAAATTGAGTCACTGATCGGCAAAGTCCGCTTTTCCCGACTCGGCGTCAAATTAGCCGAAACGCACAATAAAGGCTACCGCTGGCAGCATGAAGCCGTCATCGCGCTCGCCAACCCAAATCACAGCCATGCGTTTGAACTGACGCTTGCCGAAGCTGAAGAGTGGTACCGCGGCCGGGATGTCTACCCACAAGCCACACCGACGAGTGACGACGTACTGGTTACATTCCAGCATCAGCCTATCGGTCTGGCAAAACGTATTGGATCGCGACTGAAGAATAGCTACCCACGCGATCTTGTCCGGGATGGCAAACTCTTTACGGGATAA
PROTEIN sequence
Length: 474
VAYFPDAFLTKMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLTLTAPYNWSLTPVPWCAEGFWIERDEEESVPLGSTAEHLSGLFYIQEASSMLPVAALFAEGNTPERVMDVAAAPGSKTTQIAAKMNNRGAILANEFSASRVKVLHANISRCGIANVALTHFDGRVFGAALPESFDAILLDAPCSGEGVVRKDPDALKNWSPESNLEIAATQRELLDSAFHALRPGGTLVYSTCTLNREENENVMQWLIETYPDAVEFLPLGDLFPQAERALTPEGFLHVFPQIYDCEGFFVARLRKTAAIPPLPAPTYKVGNFPFSPLKGRESALVAQAASACGLQWEDNLRLWQRDKEIWLFPTEIESLIGKVRFSRLGVKLAETHNKGYRWQHEAVIALANPNHSHAFELTLAEAEEWYRGRDVYPQATPTSDDVLVTFQHQPIGLAKRIGSRLKNSYPRDLVRDGKLFTG*