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64_002_scaffold_50

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Displaying items 1-30 of 118 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_50_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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495..1136
DNA (642bp) protein (214aa)
Serine threonine protein phosphatase 1 n=5 Tax=Citrobacter RepID=J1G1Z3_9ENTR
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJC12116.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
serine/threonine protein phosphatase
64_002_scaffold_50_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1137..1328)
DNA (192bp) protein (64aa)
Secreted protein n=5 Tax=Citrobacter RepID=J0M4C7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC10274.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_002_scaffold_50_3
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1431..1670)
DNA (240bp) protein (80aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=D4B6A2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFE10561.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
64_002_scaffold_50_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1768..3189)
DNA (1422bp) protein (474aa)
Ribosomal RNA small subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01579}; EC=2.1.1.178 {ECO:0000256|HAMAP-Rule:MF_01579};; 16S rRNA m5C1407 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01579}; rRNA (cytosine-C(5)-)-methyltransferase RsmF {ECO:0000256|HAMAP-Rule:MF_01579}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Ribosomal RNA small subunit methyltransferase F n=1 Tax=Citrobacter sp. KTE30 RepID=R8UQK6_9ENTR
yebU; RNA methyltransferase RsmF
64_002_scaffold_50_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3269..5902)
DNA (2634bp) protein (878aa)
Mce-related protein n=5 Tax=Citrobacter RepID=J0LY04_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71269.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_002_scaffold_50_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5871..7154)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QIK2_CITFR
Membrane protein {ECO:0000313|EMBL:KJC10271.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_002_scaffold_50_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7283..7780
DNA (498bp) protein (166aa)
GAF sensor protein n=6 Tax=Citrobacter RepID=J0M4C1_9ENTR
Free methionine-R-sulfoxide reductase {ECO:0000313|EMBL:KJC10270.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Free methionine-R-sulfoxide reductase
64_002_scaffold_50_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7877..8563
DNA (687bp) protein (229aa)
ProP effector n=6 Tax=Citrobacter RepID=J0VQM1_9ENTR
RNA chaperone ProQ {ECO:0000256|HAMAP-Rule:MF_00749, ECO:0000256|SAAS:SAAS00012015}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
prop expression regulator
64_002_scaffold_50_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8583..10631
DNA (2049bp) protein (683aa)
carboxy-terminal protease (EC:3.4.21.102)
Carboxy-terminal protease n=4 Tax=Citrobacter RepID=J1G238_9ENTR
Tail-specific protease {ECO:0000313|EMBL:ETX71265.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_002_scaffold_50_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10824..11705
DNA (882bp) protein (294aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Protease HtpX n=11 Tax=Citrobacter RepID=C1M5K4_9ENTR
heat shock protein HtpX
64_002_scaffold_50_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11752..13125)
DNA (1374bp) protein (458aa)
Export protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QIK5_CITFR
Multidrug MFS transporter {ECO:0000313|EMBL:KJC10266.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
multidrug MFS transporter
64_002_scaffold_50_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13300..14091
DNA (792bp) protein (264aa)
Transcriptional regulator kdgR n=5 Tax=Citrobacter RepID=C1M5K2_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC12082.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
64_002_scaffold_50_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14206..14445)
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QML2_CITFR
Membrane protein {ECO:0000313|EMBL:KJC10264.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_002_scaffold_50_14
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14610..14753
DNA (144bp) protein (48aa)
PhoP/PhoQ regulator MgrB n=8 Tax=Citrobacter RepID=D4B6B4_9ENTR
PhoPQ regulatory protein
PhoP/PhoQ regulator MgrB {ECO:0000256|HAMAP-Rule:MF_01596}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
64_002_scaffold_50_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14828..15112
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QL54_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC10262.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_002_scaffold_50_16
Serratia proteamaculans, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15908..16108
DNA (201bp) protein (67aa)
Putative stress protein, member of the CspA-family n=1 Tax=Serratia symbiotica str. Tucson RepID=E9CP40_9ENTR
cspC1; cold shock-like protein CspC
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ABV41923.1}; TaxID=399741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia proteamaculans (strain 568).;"
64_002_scaffold_50_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16315..18060
DNA (1746bp) protein (582aa)
Penicillin-binding protein n=4 Tax=Citrobacter RepID=J0M4B1_9ENTR
Peptidoglycan synthase {ECO:0000313|EMBL:KJC12077.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
peptidoglycan synthase
64_002_scaffold_50_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18124..18933
DNA (810bp) protein (270aa)
23S rRNA m(1)G745 methyltransferase n=2 Tax=Citrobacter freundii RepID=K8QWD8_CITFR
Ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:ETX71256.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
rrmA; 23S rRNA methyltransferase
64_002_scaffold_50_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18930..19496)
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Citrobacter sp. KTE30 RepID=R8UQI7_9ENTR
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_002_scaffold_50_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19929..20387)
DNA (459bp) protein (153aa)
UPF0266 membrane protein HMPREF9428_01729 n=7 Tax=Citrobacter RepID=G9SKJ1_CITFR
UPF0266 membrane protein P834_06975 {ECO:0000256|HAMAP-Rule:MF_01071}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_002_scaffold_50_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20448..21299)
DNA (852bp) protein (284aa)
PTS system mannose-specific transporter subunit IID n=6 Tax=Citrobacter RepID=K8QSU8_CITFR
PTS mannose transporter subunit IID {ECO:0000313|EMBL:KJC10256.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS mannose transporter subunit IID
64_002_scaffold_50_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21312..22112)
DNA (801bp) protein (267aa)
PTS system, mannose-specific IIC component {ECO:0000313|EMBL:CDL40227.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL40227.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Mannose permease IIC component n=8 Tax=Citrobacter RepID=C1M5J1_9ENTR
PTS system mannose-specific transporter subunit IIC
64_002_scaffold_50_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22171..23133)
DNA (963bp) protein (321aa)
PTS system mannose-specific transporter subunits IIAB n=2 Tax=Citrobacter freundii RepID=K8QWD4_CITFR
PTS mannose transporter subunit IIAB {ECO:0000313|EMBL:KJC12071.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS mannose transporter subunit IIAB
64_002_scaffold_50_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23593..25152
DNA (1560bp) protein (520aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3CLD9_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL81596.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
64_002_scaffold_50_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25159..26760)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QLS5_CITFR
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ETX71249.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
c-di-GMP phosphodiesterase
64_002_scaffold_50_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26891..28255)
DNA (1365bp) protein (455aa)
L-serine ammonia-lyase n=5 Tax=Citrobacter RepID=J1G1X4_9ENTR
Serine dehydratase {ECO:0000313|EMBL:KJC10251.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
serine dehydratase
64_002_scaffold_50_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28439..29017)
DNA (579bp) protein (193aa)
Uncharacterized Nudix hydrolase NudL {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00010716}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00280366};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Uncharacterized Nudix hydrolase NudL n=8 Tax=Citrobacter RepID=C1M5I5_9ENTR
NUDIX hydrolase
64_002_scaffold_50_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29021..30382)
DNA (1362bp) protein (454aa)
Aminodeoxychorismate synthase {ECO:0000313|EMBL:KJC10249.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KJC10249.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pabB; aminodeoxychorismate synthase (EC:2.6.1.85)
Para-aminobenzoate synthase component 1 n=1 Tax=Citrobacter sp. KTE30 RepID=R8US97_9ENTR
64_002_scaffold_50_29
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30466..30645
DNA (180bp) protein (60aa)
UPF0181 protein CSAG_01657 n=8 Tax=Enterobacteriaceae RepID=C1M5I3_9ENTR
hypothetical protein
UPF0181 protein yoaH {ECO:0000256|HAMAP-Rule:MF_00507}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
64_002_scaffold_50_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30652..30996)
DNA (345bp) protein (115aa)
RutC family protein yoaB n=8 Tax=Citrobacter RepID=C1M5I2_9ENTR
Putative translation initiation inhibitor YoaB {ECO:0000313|EMBL:CDL40237.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
Displaying items 1-30 of 118 in total

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