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64_002_scaffold_17

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Displaying items 1-30 of 99 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_17_trna_1
unknown

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4..76
DNA (73bp)
transferRNA Val
64_002_scaffold_17_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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189..1097
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Veillonella parvula ATCC 17745 RepID=D1YQ40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB86181.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
64_002_scaffold_17_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1145..1552)
DNA (408bp) protein (136aa)
UPI0003D5C25D related cluster n=1 Tax=unknown RepID=UPI0003D5C25D
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATP synthase F1 subunit epsilon
64_002_scaffold_17_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1556..2980)
DNA (1425bp) protein (475aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
ATP synthase subunit beta n=3 Tax=Veillonella RepID=D1YQ38_9FIRM
ATP synthase F1 subunit beta
64_002_scaffold_17_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2999..3853)
DNA (855bp) protein (285aa)
ATP synthase gamma chain n=4 Tax=Veillonella RepID=D6KK02_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ATP synthase F1 subunit gamma
64_002_scaffold_17_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3857..5395)
DNA (1539bp) protein (513aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
ATP synthase subunit alpha n=3 Tax=Veillonella RepID=T0T1T3_9FIRM
ATP synthase F1 subunit alpha
64_002_scaffold_17_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5412..5963)
DNA (552bp) protein (184aa)
ATP synthase subunit delta n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T260_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
ATP synthase F1 subunit delta
64_002_scaffold_17_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5968..6465)
DNA (498bp) protein (166aa)
ATP synthase subunit b n=2 Tax=Veillonella parvula RepID=D1BPA5_VEIPT
ATP synthase F0 subunit beta
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
64_002_scaffold_17_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6484..6711)
DNA (228bp) protein (76aa)
ATP synthase F0, C subunit n=8 Tax=Veillonella RepID=D1BPA6_VEIPT
ATP synthase F0 C subunit
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
64_002_scaffold_17_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6735..7427)
DNA (693bp) protein (231aa)
ATP synthase subunit a n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BPA7_VEIPT
ATP synthase F0 subunit alpha
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
64_002_scaffold_17_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7610..7978)
DNA (369bp) protein (123aa)
ATP synthase I superfamily n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQG4_9FIRM
ATP synthase I superfamily {ECO:0000313|EMBL:ETI98930.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATP synthase I
64_002_scaffold_17_11
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7989..8183)
DNA (195bp) protein (65aa)
ATP synthase protein I n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQG3_9FIRM
hypothetical protein
ATP synthase protein I {ECO:0000313|EMBL:EFG23204.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_002_scaffold_17_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8185..9327)
DNA (1143bp) protein (381aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EQC65107.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EQC65107.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T263_9FIRM
UDP-N-acetylglucosamine 2-epimerase
64_002_scaffold_17_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9385..10536)
DNA (1152bp) protein (384aa)
Glycosyltransferase, group 4 family n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZF1_9FIRM
Glycosyl transferase family 4 {ECO:0000313|EMBL:ETI98933.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
glycosyl transferase family protein
64_002_scaffold_17_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10571..11929)
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF1035_0852 n=2 Tax=Veillonella parvula ATCC 17745 RepID=D1YQ28_9FIRM
UPF0210 protein HMPREF1035_0852 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
64_002_scaffold_17_15
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11939..12214)
DNA (276bp) protein (92aa)
UPF0237 protein HMPREF1035_0851 n=4 Tax=Veillonella RepID=D1YQ27_9FIRM
UPF0237 protein HMPREF0873_01102 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
ACT domain-containing protein
64_002_scaffold_17_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12349..13986)
DNA (1638bp) protein (546aa)
UPI0003D5BA2B related cluster n=1 Tax=unknown RepID=UPI0003D5BA2B
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:ETI98936.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
64_002_scaffold_17_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14151..15101)
DNA (951bp) protein (317aa)
UPI0003D5BD0D related cluster n=1 Tax=unknown RepID=UPI0003D5BD0D
Uncharacterized protein {ECO:0000313|EMBL:ETI98937.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
64_002_scaffold_17_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15307..16203
DNA (897bp) protein (299aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D6397A related cluster n=1 Tax=unknown RepID=UPI0003D6397A
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
64_002_scaffold_17_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16200..16892
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=5 Tax=Veillonella RepID=D1BPB7_VEIPT
GntR family transcriptional regulator
FCD domain protein {ECO:0000313|EMBL:EGL77673.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
64_002_scaffold_17_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17032..18492
DNA (1461bp) protein (487aa)
Amino acid carrier protein n=3 Tax=Veillonella RepID=F5KZF8_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EGL77660.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
amino acid carrier protein
64_002_scaffold_17_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18862..20118
DNA (1257bp) protein (419aa)
Glutamate dehydrogenase n=3 Tax=Veillonella RepID=D1YQ21_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Glu/Leu/Phe/Val dehydrogenase
64_002_scaffold_17_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20289..20780)
DNA (492bp) protein (164aa)
Conserved hypothetical, predicted membrane protein (TMS5) n=2 Tax=Veillonella RepID=D6KJY7_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGL77680.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
64_002_scaffold_17_23
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21252..21941)
DNA (690bp) protein (230aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQF3_9FIRM
exsB protein
64_002_scaffold_17_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22010..22765)
DNA (756bp) protein (252aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EFB86159.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EFB86159.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Exodeoxyribonuclease III Xth n=4 Tax=Veillonella RepID=D1BPC2_VEIPT
exodeoxyribonuclease III Xth
64_002_scaffold_17_25

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comp(22903..23130)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ26198.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
64_002_scaffold_17_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23144..23962)
DNA (819bp) protein (273aa)
Rhodanese domain protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BPC4_VEIPT
rhodanese
Rhodanese domain protein {ECO:0000313|EMBL:ACZ25231.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
64_002_scaffold_17_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24149..24553)
DNA (405bp) protein (135aa)
Mutator mutT protein {ECO:0000313|EMBL:EFB86156.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFB86156.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Mutator mutT protein n=2 Tax=Veillonella RepID=D1YQ15_9FIRM
NUDIX hydrolase
64_002_scaffold_17_28
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24562..27465)
DNA (2904bp) protein (968aa)
Putative helicase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KJY1_9FIRM
Putative helicase {ECO:0000313|EMBL:EFG23190.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
type III restriction protein res subunit
64_002_scaffold_17_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27780..28709
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Veillonella parvula RepID=D1BPC7_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFB86154.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Displaying items 1-30 of 99 in total

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