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64_002_scaffold_56

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Displaying items 1-30 of 119 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_56_1
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2..2245)
DNA (2244bp) protein (748aa)
Hep_Hag superfamily (Fragment) n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLQ8_9FIRM
Hep_Hag superfamily {ECO:0000313|EMBL:EFG22851.2}; Flags: Fragment;; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
YadA domain-containing protein
64_002_scaffold_56_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2758..3780)
DNA (1023bp) protein (341aa)
UPI0003D6698D related cluster n=1 Tax=unknown RepID=UPI0003D6698D
Uncharacterized protein {ECO:0000313|EMBL:ETI98185.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
urea amidolyase-like protein
64_002_scaffold_56_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3767..4510)
DNA (744bp) protein (248aa)
UPI0003D619B1 related cluster n=1 Tax=unknown RepID=UPI0003D619B1
Allophanate hydrolase subunit 1 {ECO:0000313|EMBL:ETI98186.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
allophanate hydrolase subunit 1
64_002_scaffold_56_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4585..5781)
DNA (1197bp) protein (399aa)
Transporter, branched chain amino acid:cation symporter (LIVCS) family n=2 Tax=Veillonella RepID=D6KLQ7_9FIRM
hypothetical protein
Transporter, branched chain amino acid:cation symporter (LIVCS) family {ECO:0000313|EMBL:EFG22850.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_002_scaffold_56_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5910..6677)
DNA (768bp) protein (256aa)
UPF0271 protein HMPREF0874_01376 n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQX8_9FIRM
UPF0271 protein HMPREF0874_01376 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
LamB/YcsF family protein
64_002_scaffold_56_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6858..7505)
DNA (648bp) protein (216aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Thiamine-phosphate synthase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQV8_9FIRM
thiamine-phosphate pyrophosphorylase
64_002_scaffold_56_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7506..8144)
DNA (639bp) protein (213aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQV9_9FIRM
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EFB85568.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
thiamine biosynthesis protein ThiF
64_002_scaffold_56_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8157..9257)
DNA (1101bp) protein (367aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQW0_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EFB85569.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
thiazole biosynthesis protein ThiH
64_002_scaffold_56_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9267..10037)
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Thiazole synthase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQW1_9FIRM
thiazole biosynthesis protein
64_002_scaffold_56_10
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10039..10236)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=3 Tax=Veillonella RepID=D1BL82_VEIPT
thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EFG22843.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_002_scaffold_56_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10260..11564)
DNA (1305bp) protein (435aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Phosphomethylpyrimidine synthase n=2 Tax=Veillonella parvula ATCC 17745 RepID=D1YQW3_9FIRM
thiamine biosynthesis protein ThiC
64_002_scaffold_56_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11827..14004)
DNA (2178bp) protein (726aa)
UPI0003D650A9 related cluster n=1 Tax=unknown RepID=UPI0003D650A9
ATPase, AAA family {ECO:0000313|EMBL:ETI98192.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATPase AAA
64_002_scaffold_56_13
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14321..14482
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR59780.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
64_002_scaffold_56_14
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14479..14883
DNA (405bp) protein (135aa)
UPI0003D62AE3 related cluster n=1 Tax=unknown RepID=UPI0003D62AE3
Death-on-curing family protein {ECO:0000313|EMBL:ETJ20104.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
toxin-antitoxin system
64_002_scaffold_56_15
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15155..16027)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR59937.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein
64_002_scaffold_56_trna_7
unknown

Not on your lists

comp(16095..16168)
DNA (74bp)
transferRNA Arg
64_002_scaffold_56_trna_6
unknown

Not on your lists

comp(16273..16343)
DNA (71bp)
transferRNA Gly
64_002_scaffold_56_trna_5
unknown

Not on your lists

comp(16357..16430)
DNA (74bp)
transferRNA Pro
64_002_scaffold_56_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16809..18014)
DNA (1206bp) protein (402aa)
NAD-dependent malic enzyme n=4 Tax=Veillonella RepID=D6KLN4_9FIRM
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EFB86198.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
malic protein NAD-binding protein
64_002_scaffold_56_17
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18302..19084)
DNA (783bp) protein (261aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Veillonella RepID=D1BL65_VEIPT
S-adenosylmethionine decarboxylase
64_002_scaffold_56_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19162..19659)
DNA (498bp) protein (166aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Phosphodiesterase family protein n=3 Tax=Veillonella RepID=D1YN31_9FIRM
phosphodiesterase
64_002_scaffold_56_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19726..20301)
DNA (576bp) protein (192aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Non-canonical purine NTP pyrophosphatase n=2 Tax=Veillonella parvula RepID=D1YN32_9FIRM
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
64_002_scaffold_56_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20303..21058)
DNA (756bp) protein (252aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Ribonuclease PH n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN33_9FIRM
ribonuclease PH
64_002_scaffold_56_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21222..22646)
DNA (1425bp) protein (475aa)
Histone deacetylase family n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN34_9FIRM
Histone deacetylase family {ECO:0000313|EMBL:EFB86203.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
histone deacetylase superfamily protein
64_002_scaffold_56_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22636..24348)
DNA (1713bp) protein (571aa)
Hydantoinase/oxoprolinase family protein n=2 Tax=Veillonella RepID=D6KLN0_9FIRM
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:EGL76804.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hydantoinase/oxoprolinase
64_002_scaffold_56_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24544..25194)
DNA (651bp) protein (217aa)
F420-0:Gamma-glutamyl ligase superfamily n=2 Tax=Veillonella RepID=D6KLM9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EGL76838.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
64_002_scaffold_56_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25207..25746)
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=T0UJT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB86206.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
64_002_scaffold_56_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25759..26562)
DNA (804bp) protein (268aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Glutamate racemase n=2 Tax=Veillonella parvula RepID=D1BL57_VEIPT
glutamate racemase
64_002_scaffold_56_26
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26555..26974)
DNA (420bp) protein (140aa)
Thioesterase family protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLM6_9FIRM
Thioesterase family protein {ECO:0000313|EMBL:EFG22819.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
thioesterase superfamily protein
64_002_scaffold_56_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27091..27435)
DNA (345bp) protein (115aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1YN40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI98216.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
Displaying items 1-30 of 119 in total

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