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64_002_scaffold_43

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Displaying items 61-90 of 91 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_43_59
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(54397..54933)
DNA (537bp) protein (179aa)
Probable DNA-directed RNA polymerase subunit delta n=20 Tax=Staphylococcus epidermidis RepID=RPOE_STAEQ rbh
DNA-directed RNA polymerase subunit delta
Probable DNA-directed RNA polymerase subunit delta {ECO:0000255|HAMAP-Rule:MF_00357}; RNAP delta factor {ECO:0000255|HAMAP-Rule:MF_00357}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
64_002_scaffold_43_60
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(55044..55904)
DNA (861bp) protein (287aa)
Spermine/spermidine acetyltransferase blt n=13 Tax=Staphylococcus epidermidis RepID=Q8CRM4_STAES
spermine/spermidine acetyltransferase blt
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFE60173.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_43_61
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

56207..57004
DNA (798bp) protein (266aa)
Pantothenate kinase type II, eukaryotic (EC:2.7.1.33)
Type II pantothenate kinase {ECO:0000255|HAMAP-Rule:MF_01273}; EC=2.7.1.33 {ECO:0000255|HAMAP-Rule:MF_01273};; PanK-II {ECO:0000255|HAMAP-Rule:MF_01273}; Pantothenic acid kinase {ECO:0000255|HAMAP-Rule:MF_01273}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Type II pantothenate kinase n=39 Tax=Staphylococcus epidermidis RepID=COAW_STAES rbh
64_002_scaffold_43_62
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(57226..57891)
DNA (666bp) protein (222aa)
Uncharacterized protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HM91_STAEQ
Hypothetical protein SAV2131
Uncharacterized protein {ECO:0000313|EMBL:AAW55068.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_43_63
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(58065..59255)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=Q8CRM1_STAES
Hypothetical protein SAV2132
Uncharacterized protein {ECO:0000313|EMBL:EFE60176.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_43_64
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(59255..60439)
DNA (1185bp) protein (395aa)
Amidase n=34 Tax=Staphylococcus epidermidis RepID=Q8CNI1_STAES
HmrA protein involved in methicillin resistance / amidohydrolase of M40 family
Amidohydrolase {ECO:0000313|EMBL:EFE60177.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_43_65
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

60667..61137
DNA (471bp) protein (157aa)
S-ribosylhomocysteine lyase / Autoinducer-2 production protein LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
S-ribosylhomocysteine lyase n=73 Tax=Staphylococcus epidermidis RepID=LUXS_STAEQ rbh
64_002_scaffold_43_66
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(61288..61638)
DNA (351bp) protein (117aa)
Uncharacterized protein n=66 Tax=Staphylococcus epidermidis RepID=Q8CRM0_STAES
Hypothetical protein SAV2135
Uncharacterized protein {ECO:0000313|EMBL:EES37306.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_002_scaffold_43_67
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(61635..62828)
DNA (1194bp) protein (398aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
deoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=8 Tax=Staphylococcus epidermidis RepID=F3SYF8_STAEP
64_002_scaffold_43_68
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(62838..64139)
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase; Short=PYNP;; EC=2.4.2.2;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Pyrimidine-nucleoside phosphorylase n=9 Tax=Staphylococcus epidermidis RepID=H3VGR1_STAEP
64_002_scaffold_43_69
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(64172..64837)
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Deoxyribose-phosphate aldolase; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Deoxyribose-phosphate aldolase n=8 Tax=Staphylococcus epidermidis RepID=H3V3E2_STAEP
64_002_scaffold_43_70
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

65042..65752
DNA (711bp) protein (237aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Purine nucleoside phosphorylase DeoD-type n=23 Tax=Staphylococcus epidermidis RepID=Q8CNH6_STAES
64_002_scaffold_43_71
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(65876..66346)
DNA (471bp) protein (157aa)
DNA protection during starvation protein 1 n=8 Tax=Staphylococcus epidermidis RepID=H3V3E0_STAEP
Ferritin-like protein {ECO:0000313|EMBL:EES37311.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
general stress protein 20U
64_002_scaffold_43_72
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(66510..66920)
DNA (411bp) protein (137aa)
Uncharacterized protein n=76 Tax=Staphylococcus epidermidis RepID=Q5HM80_STAEQ
Hypothetical protein SAV2140
Uncharacterized protein {ECO:0000313|EMBL:ESV19706.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_002_scaffold_43_73
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(67101..68477)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=17 Tax=Staphylococcus epidermidis RepID=Q8CRL8_STAES
Hypothetical protein SAV2141
EVE domain protein {ECO:0000313|EMBL:ESV19707.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_002_scaffold_43_74
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(68710..68937)
DNA (228bp) protein (76aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HM78_STAEQ
Hypothetical protein SAV2142
Uncharacterized protein {ECO:0000313|EMBL:EES37315.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_002_scaffold_43_75
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(68992..69930)
DNA (939bp) protein (313aa)
mannose-6-phosphate isomerase, class I (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:AAW55090.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AAW55090.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Mannnose-6 phospate isomelase pmi n=19 Tax=Staphylococcus epidermidis RepID=Q8CNH4_STAES
64_002_scaffold_43_76

Not on your lists

comp(70225..70374)
DNA (150bp) protein (50aa)
Uncharacterized protein n=4 Tax=Staphylococcus epidermidis RepID=Q5HM76_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ19275.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_43_77

Not on your lists

comp(70572..71228)
DNA (657bp) protein (219aa)
Uncharacterized protein n=14 Tax=Staphylococcus epidermidis RepID=Q8CRL4_STAES
oxidoreductase ylbE
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ETJ19276.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_43_78

Not on your lists

71352..71714
DNA (363bp) protein (121aa)
Repressor protein n=42 Tax=Staphylococcus epidermidis RepID=Q8CNH3_STAES
repressor protein
Transcriptional regulator CzrA {ECO:0000313|EMBL:ETJ19277.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_43_79
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

71701..72654
DNA (954bp) protein (318aa)
CzrB protein n=50 Tax=Staphylococcus epidermidis RepID=Q8CNH2_STAES
Zn(II) and Co(II) transmembrane diffusion facilitator
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFE60193.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_43_80
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(72915..73691)
DNA (777bp) protein (259aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q8CRL3_STAES
hypothetical protein
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:EFE60194.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_43_81
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

73779..74930
DNA (1152bp) protein (384aa)
Lytic regulatory protein, putative n=40 Tax=Staphylococcus epidermidis RepID=Q5HM71_STAEQ
lytic regulatory protein
Lytic regulatory protein, putative {ECO:0000313|EMBL:AAW55103.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_43_82
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(75235..76092)
DNA (858bp) protein (286aa)
Cof-like hydrolase, HAD-superfamily, subfamily IIB n=47 Tax=Staphylococcus epidermidis RepID=Q5HM70_STAEQ
Hydrolase (HAD superfamily)
Cof-like hydrolase, HAD-superfamily, subfamily IIB {ECO:0000313|EMBL:AAW55104.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_43_83
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(76587..78392)
DNA (1806bp) protein (602aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000255|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000255|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000255|HAMAP-Rule:MF_00164}; GFAT {ECO:0000255|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000255|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000255|HAMAP-Rule:MF_00164}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=39 Tax=Staphylococcus epidermidis RepID=GLMS_STAEQ
64_002_scaffold_43_84
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(78433..78588)
DNA (156bp) protein (52aa)
Uncharacterized protein n=22 Tax=Staphylococcus epidermidis RepID=C5QCU3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE60198.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
64_002_scaffold_43_85
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(79023..80378)
DNA (1356bp) protein (452aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.-)
Phosphoglucosamine mutase {ECO:0000255|HAMAP-Rule:MF_01554}; EC=5.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01554};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Phosphoglucosamine mutase n=45 Tax=Staphylococcus epidermidis RepID=GLMM_STAEQ rbh
64_002_scaffold_43_86
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(80403..81338)
DNA (936bp) protein (312aa)
YbbR-like protein n=8 Tax=Staphylococcus epidermidis RepID=H3V3C6_STAEP
uncharacterized secreted protein, YBBR Bacillus subtilis homolog
YbbR-like protein {ECO:0000313|EMBL:EFE60200.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_43_87
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(81339..82220)
DNA (882bp) protein (294aa)
TIGR00159 family protein n=26 Tax=Staphylococcus epidermidis RepID=C5QTU6_STAEP
TIGR00159 family protein {ECO:0000313|EMBL:EFE60201.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
ABC transporter, permease protein YbbP clustered with maltose/maltodextrin transporter / Tlr1762 protein
64_002_scaffold_43_trna_2
unknown

Not on your lists

comp(82315..82387)
DNA (73bp)
transferRNA Lys
Displaying items 61-90 of 91 in total

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